RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	EIF6	P56537	245 aa	Known RBP	18.94	■□□□□ 0.62
PHGDH-223	ENST00000641597	KIF4B	Q2VIQ3	1234 aa		18.94	■□□□□ 0.62
PHGDH-223	ENST00000641597	RTFDC1	Q9BY42	306 aa	Predicted RBP	18.94	■□□□□ 0.62
PHGDH-223	ENST00000641597	PDS5A	Q29RF7	1337 aa	Known RBP	18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	PALM3	A6NDB9	673 aa	Predicted RBP	18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	CCNT1	O60563	726 aa	Known RBP	18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	TXLNA	P40222	546 aa		18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	PNKP	Q96T60	521 aa		18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	FRMPD2	Q68DX3	1309 aa	Predicted RBP	18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597		B4DLN1	442 aa		18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	ENC1	O14682	589 aa		18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	TEC	P42680	631 aa		18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	NAPA	P54920	295 aa		18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	JAKMIP3	Q5VZ66	844 aa		18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	ARGLU1	Q9NWB6	273 aa	Predicted RBP	18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	BIN2	Q9UBW5	565 aa	Predicted RBP	18.93	■□□□□ 0.62
PHGDH-223	ENST00000641597	RFC4	P35249	363 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	CDK8	P49336	464 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	CHMP4BP1	P59074	171 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	STK4	Q13043	487 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	CCDC178	Q5BJE1	867 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	SPTY2D1	Q68D10	685 aa	Predicted RBP	18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	CEP95	Q96GE4	821 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	TRIM47	Q96LD4	638 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	PIGS	Q96S52	555 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	EYA3	Q99504	573 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	HDAC6	Q9UBN7	1215 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	FLT1	P17948	1338 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	RHOXF2B	P0C7M4	288 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	FAM196A	Q6ZSG2	479 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	WDR66	Q8TBY9	1149 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	GJA10	Q969M2	543 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	RHOXF2	Q9BQY4	288 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	ANKZF1	Q9H8Y5	726 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	AGPAT5	Q9NUQ2	364 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	RNF216	Q9NWF9	866 aa	Predicted RBP	18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	GUCA1B	Q9UMX6	200 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	ITIH6	Q6UXX5	1313 aa		18.92	■□□□□ 0.62
PHGDH-223	ENST00000641597	UFL1	O94874	794 aa		18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	GRAP	Q13588	217 aa		18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	NCAPH2	Q6IBW4	605 aa		18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	GPR161	Q8N6U8	529 aa	Known RBP	18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	GRAPL	Q8TC17	118 aa	Predicted RBP	18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	NAA15	Q9BXJ9	866 aa	Known RBP	18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	SNED1	Q8TER0	1413 aa		18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	SMCO2	A6NFE2	343 aa		18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	USP17L5	A8MUK1	530 aa		18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	GOLGA1	Q92805	767 aa		18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	KBTBD4	Q9NVX7	518 aa		18.91	■□□□□ 0.62
PHGDH-223	ENST00000641597	WDR59	Q6PJI9	974 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	POTED	Q86YR6	584 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	MB21D1	Q8N884	522 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	CNBD1	Q8NA66	436 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	DUSP9	Q99956	384 aa	Known RBP	18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	SH3GLB2	Q9NR46	395 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	RMND1	Q9NWS8	449 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	CDC23	Q9UJX2	597 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	BTAF1	O14981	1849 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	RASSF10	A6NK89	507 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	BAG3	O95817	575 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	TTI2	Q6NXR4	508 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	SRGAP1	Q7Z6B7	1085 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	TEX11	Q8IYF3	940 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	ANKS1A	Q92625	1134 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597	RABGGTA	Q92696	567 aa		18.9	■□□□□ 0.62
PHGDH-223	ENST00000641597		F8W031	263 aa	Predicted RBP	18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	TPM1	P09493	284 aa		18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	FECH	P22830	423 aa		18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	RC3H1	Q5TC82	1133 aa	Known RBP	18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	ANKRD40	Q6AI12	368 aa		18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	CABP7	Q86V35	215 aa		18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	TMTC1	Q8IUR5	882 aa		18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	NOA1	Q8NC60	698 aa	Known RBP	18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	FUT8	Q9BYC5	575 aa		18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	CD209	Q9NNX6	404 aa		18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	MAST2	Q6P0Q8	1798 aa		18.89	■□□□□ 0.62
PHGDH-223	ENST00000641597	COL24A1	Q17RW2	1714 aa		18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	SRGAP2	O75044	1071 aa		18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	KIF20A	O95235	890 aa		18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	ST5	P78524	1137 aa		18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	PICALM	Q13492	652 aa		18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	CYP26C1	Q6V0L0	522 aa		18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	LRRC47	Q8N1G4	583 aa	Known RBP	18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	COA7	Q96BR5	231 aa		18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	LRRC4B	Q9NT99	713 aa		18.89	■□□□□ 0.61
PHGDH-223	ENST00000641597	CTAGE9	A4FU28	777 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	TXK	P42681	527 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	PDE4D	Q08499	809 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	PRR5L	Q6MZQ0	368 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	CSGALNACT2	Q8N6G5	542 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	ZNF507	Q8TCN5	953 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	TBCK	Q8TEA7	893 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	MMTAG2	Q9BU76	263 aa	Known RBP	18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	EPN1	Q9Y6I3	576 aa	Predicted RBP	18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	DUSP10	Q9Y6W6	482 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	RCCD1	A6NED2	376 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597	LGALS16	A8MUM7	142 aa		18.88	■□□□□ 0.61
PHGDH-223	ENST00000641597		H7C1D1	291 aa		18.88	■□□□□ 0.61

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