RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 TAP1Q03518 808 aa11.76□□□□□ -0.53
PHGDH-212ENST00000641247 FAM83BQ5T0W9 1011 aa11.76□□□□□ -0.53
PHGDH-212ENST00000641247 ARNTL2Q8WYA1 636 aa11.76□□□□□ -0.53
PHGDH-212ENST00000641247 NUP88Q99567 741 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-212ENST00000641247 MYO5AQ9Y4I1 1855 aaKnown RBP11.75□□□□□ -0.53
PHGDH-212ENST00000641247 MAGEB6P1A0A0J9YX57 407 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 BCAR3O75815 825 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 SLC4A3P48751 1232 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 GRB10Q13322 594 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 ITGA7Q13683 1181 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 TMEM67Q5HYA8 995 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 LCORLQ8N3X6 602 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
PHGDH-212ENST00000641247 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
PHGDH-212ENST00000641247 ARHGEF10LQ9HCE6 1279 aa11.75□□□□□ -0.53
PHGDH-212ENST00000641247 MYO9BQ13459 2157 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
PHGDH-212ENST00000641247 PRR33A8MZF0 331 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-212ENST00000641247 CHGBP05060 677 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 CDK8P49336 464 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 RARSP54136 660 aaKnown RBP11.74□□□□□ -0.53
PHGDH-212ENST00000641247 NHLH1Q02575 133 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 SNRNP48Q6IEG0 339 aaKnown RBP11.74□□□□□ -0.53
PHGDH-212ENST00000641247 ARMCX2Q7L311 632 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 DEFB128Q7Z7B8 93 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 CERS3Q8IU89 383 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 CCDC144CPQ8IYA2 1237 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 ABHD16BQ9H3Z7 469 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 GNEQ9Y223 722 aaKnown RBP11.74□□□□□ -0.53
PHGDH-212ENST00000641247 MYH1P12882 1939 aa11.74□□□□□ -0.53
PHGDH-212ENST00000641247 TCRBV5S4A2TA0A5A2 114 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 SURF6O75683 361 aaKnown RBP11.73□□□□□ -0.53
PHGDH-212ENST00000641247 CYP2C9P11712 490 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 ATP8B2P98198 1209 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 CNTN2Q02246 1040 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 MUC6Q6W4X9 2439 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-212ENST00000641247 RPUSD2Q8IZ73 545 aaKnown RBP11.73□□□□□ -0.53
PHGDH-212ENST00000641247 CPXCR1Q8N123 301 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-212ENST00000641247 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 PPP1R13LQ8WUF5 828 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 FBXL18Q96ME1 805 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 SPC25Q9HBM1 224 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 PDGFCQ9NRA1 345 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 PIEZO1Q92508 2521 aa11.73□□□□□ -0.53
PHGDH-212ENST00000641247 ZNFX1Q9P2E3 1918 aaKnown RBP11.72□□□□□ -0.53
PHGDH-212ENST00000641247 GBF1Q92538 1859 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 LRRC37A2A6NM11 1700 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 ZNF532Q9HCE3 1301 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-212ENST00000641247 LCHNA4D1U4 455 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 SOWAHBA6NEL2 793 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 RAD21O60216 631 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 IL9P15248 144 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 PDE6AP16499 860 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 SMPD1P17405 629 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 TNFAIP2Q03169 654 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 TMCO2Q7Z6W1 182 aaPredicted RBP11.72□□□□□ -0.53
PHGDH-212ENST00000641247 FAM178BQ8IXR5 827 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 GJD3Q8N144 294 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 ARHGAP45Q92619 1136 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 PHOX2BQ99453 314 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 TEX13BQ9BXU2 312 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 CRNKL1Q9BZJ0 848 aaKnown RBP11.72□□□□□ -0.53
PHGDH-212ENST00000641247 C1orf115Q9H7X2 142 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 ARMT1Q9H993 441 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 RAVER2Q9HCJ3 691 aaKnown RBP11.72□□□□□ -0.53
PHGDH-212ENST00000641247 TRMT13Q9NUP7 481 aaKnown RBP11.72□□□□□ -0.53
PHGDH-212ENST00000641247 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
PHGDH-212ENST00000641247 NOP58Q9Y2X3 529 aaKnown RBP11.72□□□□□ -0.53
PHGDH-212ENST00000641247 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-212ENST00000641247 TRIM27P14373 513 aa11.71□□□□□ -0.53
PHGDH-212ENST00000641247 COPB2P35606 906 aa11.71□□□□□ -0.53
PHGDH-212ENST00000641247 OS9Q13438 667 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-212ENST00000641247 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
PHGDH-212ENST00000641247 SLC9C2Q5TAH2 1124 aa11.71□□□□□ -0.53
PHGDH-212ENST00000641247 C12orf60Q5U649 245 aa11.71□□□□□ -0.53
PHGDH-212ENST00000641247 ERICH6BQ5W0A0 696 aa11.71□□□□□ -0.53
PHGDH-212ENST00000641247 SLF1Q9BQI6 1058 aa11.71□□□□□ -0.53
PHGDH-212ENST00000641247 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
PHGDH-212ENST00000641247 SH2D4AQ9H788 454 aa11.71□□□□□ -0.53
PHGDH-212ENST00000641247 USP17L12C9JPN9 530 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 USP17L21D6R901 530 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 ATP2A1O14983 1001 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 TAPT1Q6NXT6 567 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
PHGDH-212ENST00000641247 HERC6Q8IVU3 1022 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 ANKRD35Q8N283 1001 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 CLUAP1Q96AJ1 413 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 CCDC17Q96LX7 622 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 UIMC1Q96RL1 719 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 KANSL2Q9H9L4 492 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 PARP14Q460N5 1801 aa11.7□□□□□ -0.54
PHGDH-212ENST00000641247 F5H6K3 240 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 CABYRO75952 493 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 KLRC3Q07444 240 aa11.69□□□□□ -0.54
PHGDH-212ENST00000641247 GPNMBQ14956 572 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms