RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 ZNF263O14978 683 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 ELF1P32519 619 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 CDR1P51861 262 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 KIF5AQ12840 1032 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 ODF2Q5BJF6 829 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 AENQ8WTP8 325 aaKnown RBP15.33■□□□□ 0.04
SCARB2-227ENST00000640957 ZNF473Q8WTR7 871 aaKnown RBP15.33■□□□□ 0.04
SCARB2-227ENST00000640957 CCT8L2Q96SF2 557 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 GOLPH3Q9H4A6 298 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 GGT7Q9UJ14 662 aa15.33■□□□□ 0.04
SCARB2-227ENST00000640957 MYH10P35580 1976 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 PLEKHA8P1O95397 391 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 FMNL1O95466 1100 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-227ENST00000640957 PHKA1P46020 1223 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 CLNS1AP54105 237 aaKnown RBP15.32■□□□□ 0.04
SCARB2-227ENST00000640957 HLTFQ14527 1009 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCARB2-227ENST00000640957 WTAPQ15007 396 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 CFAP58Q5T655 872 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 C2CD5Q86YS7 1000 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 IRF2BP1Q8IU81 584 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 CREG2Q8IUH2 290 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 MAGEB6Q8N7X4 407 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 CPDO75976 1380 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 CLGNO14967 610 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 STARD3NLO95772 234 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 TBC1D8BQ0IIM8 1120 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 C8orf74Q6P047 294 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 DDX42Q86XP3 938 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCARB2-227ENST00000640957 MB21D1Q8N884 522 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 SLC40A1Q9NP59 571 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 ZNF233A6NK53 670 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 CKAP4Q07065 602 aaKnown RBP15.32■□□□□ 0.04
SCARB2-227ENST00000640957 CCDC42Q96M95 316 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 KANSL2Q9H9L4 492 aa15.32■□□□□ 0.04
SCARB2-227ENST00000640957 IRS4O14654 1257 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-227ENST00000640957 KANK3Q6NY19 840 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 IQCA1Q86XH1 822 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 TRIML1Q8N9V2 468 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 SALL4Q9UJQ4 1053 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 CCDC196A0A1B0GTZ2 297 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 FTCDO95954 541 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 TUBB2AQ13885 445 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 CCDC155Q8N6L0 562 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 SDR42E1Q8WUS8 393 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 NLRP3Q96P20 1036 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 UIMC1Q96RL1 719 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 TUBB2BQ9BVA1 445 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 EPB41L4AQ9HCS5 686 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-227ENST00000640957 ZNHIT6Q9NWK9 470 aaKnown RBP15.31■□□□□ 0.04
SCARB2-227ENST00000640957 DDX20Q9UHI6 824 aaKnown RBP15.31■□□□□ 0.04
SCARB2-227ENST00000640957 BAIAP2L1Q9UHR4 511 aa15.31■□□□□ 0.04
SCARB2-227ENST00000640957 QPCTQ16769 361 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 PAPD7Q5XG87 772 aaKnown RBP15.3■□□□□ 0.04
SCARB2-227ENST00000640957 MFSD6Q6ZSS7 791 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 CRACR2BQ8N4Y2 399 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-227ENST00000640957 ZNF526Q8TF50 670 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-227ENST00000640957 SH3GL2Q99962 352 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 EPHB6O15197 1021 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 OPA1O60313 960 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 NR1D1P20393 614 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 MTIF2P46199 727 aaKnown RBP15.3■□□□□ 0.04
SCARB2-227ENST00000640957 RASSF7Q02833 373 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 EVX2Q03828 476 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 ACCSLQ4AC99 568 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 THOC1Q96FV9 657 aaKnown RBP15.3■□□□□ 0.04
SCARB2-227ENST00000640957 KRT12Q99456 494 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 VEZTQ9HBM0 779 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 AKR1B10O60218 316 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 MCM3P25205 808 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 NEDD9Q14511 834 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 NLRP14Q86W24 1093 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 SPATA20Q8TB22 786 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 PIGBQ92521 554 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 IFIH1Q9BYX4 1025 aaKnown RBP15.3■□□□□ 0.04
SCARB2-227ENST00000640957 MMRN2Q9H8L6 949 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 ZBTB1Q9Y2K1 713 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 PCDH11XQ9BZA7 1347 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 PCDH11YQ9BZA8 1340 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
SCARB2-227ENST00000640957 SMIM23A6NLE4 172 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 HEXIM1O94992 359 aaKnown RBP15.29■□□□□ 0.04
SCARB2-227ENST00000640957 PDE6AP16499 860 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 SPA17Q15506 151 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 HAUS3Q68CZ6 603 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 MAEAQ7L5Y9 396 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 CCDC51Q96ER9 411 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 MYO1AQ9UBC5 1043 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 ERICH2A1L162 156 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 PHF20L1A8MW92 1017 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 GOLGA8KD6RF30 607 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 DNM1LO00429 736 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 RPN1P04843 607 aaKnown RBP15.29■□□□□ 0.04
SCARB2-227ENST00000640957 IFNAR1P17181 557 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 B4GALNT4Q76KP1 1039 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 IFNL3Q8IZI9 196 aa15.29■□□□□ 0.04
SCARB2-227ENST00000640957 FANCBQ8NB91 859 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms