RNA–Protein interactions for RNA: ENST00000640765.1

TRPS1-212, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 9,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-212ENST00000640765 TTC25Q96NG3 672 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 SIKE1Q9BRV8 207 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 TMEM245Q9H330 911 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 RINT1Q6NUQ1 792 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 CEP85Q6P2H3 762 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 ECHDC1Q9NTX5 307 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 KIF23Q02241 960 aaPredicted RBP9.23□□□□□ -0.93
TRPS1-212ENST00000640765 GMEB1Q9Y692 573 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 MAP4P27816 1152 aaKnown RBP9.23□□□□□ -0.93
TRPS1-212ENST00000640765 GNL1P36915 607 aaPredicted RBP9.23□□□□□ -0.93
TRPS1-212ENST00000640765 NSFP46459 744 aaKnown RBP9.23□□□□□ -0.93
TRPS1-212ENST00000640765 FANCCQ00597 558 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 NFE2L2Q16236 605 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 PDZD4Q76G19 769 aaPredicted RBP9.23□□□□□ -0.93
TRPS1-212ENST00000640765 LZICQ8WZA0 190 aa9.23□□□□□ -0.93
TRPS1-212ENST00000640765 RASSF9O75901 435 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 BSPRYQ5W0U4 402 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 ZGPATQ8N5A5 531 aaKnown RBP9.22□□□□□ -0.93
TRPS1-212ENST00000640765 SKA2Q8WVK7 121 aaPredicted RBP9.22□□□□□ -0.93
TRPS1-212ENST00000640765 GYG2O15488 501 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 BEND3Q5T5X7 828 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 ASCC2Q9H1I8 757 aaPredicted RBP9.22□□□□□ -0.93
TRPS1-212ENST00000640765 FGD6Q6ZV73 1430 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 E2F6O75461 281 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 APOBRQ0VD83 1088 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 Q6ZUG5 572 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 NOSTRINQ8IVI9 506 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 CSGALNACT2Q8N6G5 542 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 THAP11Q96EK4 314 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 TTC1Q99614 292 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 EPHB4P54760 987 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 MLKLQ8NB16 471 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 VPS16Q9H269 839 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 P4HA1P13674 534 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 CNGA3Q16281 694 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 CYTH2Q99418 400 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 KLC2Q9H0B6 622 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 AKNAD1Q5T1N1 836 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 KCNK3O14649 394 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 TCP1P17987 556 aaKnown RBP9.22□□□□□ -0.93
TRPS1-212ENST00000640765 HAUS3Q68CZ6 603 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 KCTD16Q68DU8 428 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 QKIQ96PU8 341 aaKnown RBP eCLIP9.22□□□□□ -0.932e-7■■■■■ 32.9
TRPS1-212ENST00000640765 RPS6KC1Q96S38 1066 aa9.22□□□□□ -0.93
TRPS1-212ENST00000640765 BICC1Q9H694 974 aaKnown RBP9.22□□□□□ -0.93
TRPS1-212ENST00000640765 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.22□□□□□ -0.93
TRPS1-212ENST00000640765 ZNF500O60304 480 aaPredicted RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 GNAT2P19087 354 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 YWHAEP62258 255 aaKnown RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 KLHL30Q0D2K2 578 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 TTLL12Q14166 644 aaPredicted RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 HIBCHQ6NVY1 386 aaPredicted RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 TRIM50Q86XT4 487 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 DCLK2Q8N568 766 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 OSBPL1AQ9BXW6 950 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 TMEM60Q9H2L4 133 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 RPN1P04843 607 aaKnown RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 PSMA4P25789 261 aaKnown RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 TMPOP42166 694 aaKnown RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 SMYD2Q9NRG4 433 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 OLA1Q9NTK5 396 aaKnown RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 MTRF1O75570 445 aaKnown RBP9.21□□□□□ -0.93
TRPS1-212ENST00000640765 IFNB1P01574 187 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 PRPSAP1Q14558 356 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 BRD8Q9H0E9 1235 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 LDHCP07864 332 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 SRGAP2BP0DMP2 458 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 KLC3Q6P597 504 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 CDH24Q86UP0 819 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 MAML1Q92585 1016 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 TRPV6Q9H1D0 765 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 RAB20Q9NX57 234 aa9.21□□□□□ -0.93
TRPS1-212ENST00000640765 RRAGDQ9NQL2 400 aaPredicted RBP9.21□□□□□ -0.94
TRPS1-212ENST00000640765 DONSONQ9NYP3 566 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 USTQ9Y2C2 406 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 DNMBPQ6XZF7 1577 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 FAM135AQ9P2D6 1515 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 EIF3BP55884 814 aaKnown RBP9.21□□□□□ -0.94
TRPS1-212ENST00000640765 PLD3Q8IV08 490 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 C6orf203Q9P0P8 240 aaPredicted RBP9.21□□□□□ -0.94
TRPS1-212ENST00000640765 PNMA2Q9UL42 364 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 TPCN1Q9ULQ1 816 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 ANKRD36BQ8N2N9 1353 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 A0A1B0GVL5 298 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.21□□□□□ -0.94
TRPS1-212ENST00000640765 TSPAN9O75954 239 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 VCAM1P19320 739 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 NDUFA5Q16718 116 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 OMA1Q96E52 524 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 CCPG1Q9ULG6 757 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 RARSP54136 660 aaKnown RBP9.21□□□□□ -0.94
TRPS1-212ENST00000640765 ZNF445P59923 1031 aa9.21□□□□□ -0.94
TRPS1-212ENST00000640765 CDR2LQ86X02 465 aaPredicted RBP9.21□□□□□ -0.94
TRPS1-212ENST00000640765 HNRNPRO43390 633 aaKnown RBP9.2□□□□□ -0.94
TRPS1-212ENST00000640765 ACTN1P12814 892 aa9.2□□□□□ -0.94
TRPS1-212ENST00000640765 MDM2Q00987 491 aaPredicted RBP9.2□□□□□ -0.94
TRPS1-212ENST00000640765 KRT73Q86Y46 540 aa9.2□□□□□ -0.94
TRPS1-212ENST00000640765 NLRP4Q96MN2 994 aa9.2□□□□□ -0.94
TRPS1-212ENST00000640765 NDE1Q9NXR1 346 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms