RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 ADRB1P08588 477 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 SERINC3Q13530 473 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 PDZRN4Q6ZMN7 1036 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 LRRC56Q8IYG6 542 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 C12orf50Q8NA57 414 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 GSTCDQ8NEC7 633 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 DHX38Q92620 1227 aaKnown RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 CCDC140Q96MF4 163 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 MCMBPQ9BTE3 642 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 KLHL25Q9H0H3 589 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 PPP4R2Q9NY27 417 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 HS3ST4Q9Y661 456 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 SLC4A7Q9Y6M7 1214 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 LTBP3Q9NS15 1303 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 DNAJC25-GNG10A0A024R161 153 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 H7BY64 318 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 FOXD2O60548 495 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 F13A1P00488 732 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 CR1LQ2VPA4 569 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 ZNF385BQ569K4 471 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 UBXN11Q5T124 520 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 CREB3L3Q68CJ9 461 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 REXO1L1PQ8IX06 675 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 NTN5Q8WTR8 489 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 KISS1RQ969F8 398 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 SGSM3Q96HU1 749 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 CCDC74BQ96LY2 380 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 ATP13A1Q9HD20 1204 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 DLL4Q9NR61 685 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 STRIP2Q9ULQ0 834 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 PNMA6FA0A0J9YX94 578 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 K7ESF4 209 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 KLF4O43474 513 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 HTR3BO95264 441 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 POLR3DP05423 398 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 EIF4BP23588 611 aaKnown RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 CD96P40200 585 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 ZP2Q05996 745 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 PSME1Q06323 249 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 PPM1JQ5JR12 505 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 PRAMEF13Q5VWM6 474 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 GPRIN1Q7Z2K8 1008 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 LDHDQ86WU2 507 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 C7orf61Q8IZ16 206 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 BCL6BQ8N143 479 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 OXR1Q8N573 874 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 ABHD4Q8TB40 342 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 ZSCAN18Q8TBC5 510 aaPredicted RBP0.76□□□□□ -2.29
CCDC7-215ENST00000639629 DPF3Q92784 378 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 CYP26B1Q9NR63 512 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 RNF19AQ9NV58 838 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 WWC3Q9ULE0 1092 aa0.76□□□□□ -2.29
CCDC7-215ENST00000639629 RFPL3O75679 317 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 USP17L7P0C7H9 530 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 RFX1P22670 979 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 RPL13P26373 211 aaKnown RBP0.75□□□□□ -2.29
CCDC7-215ENST00000639629 YARSP54577 528 aaKnown RBP0.75□□□□□ -2.29
CCDC7-215ENST00000639629 ERVFC1P60507 584 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 CLCQ05315 142 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 DUSP4Q13115 394 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 PLEKHN1Q494U1 663 aaPredicted RBP0.75□□□□□ -2.29
CCDC7-215ENST00000639629 ZC3H12BQ5HYM0 836 aaKnown RBP0.75□□□□□ -2.29
CCDC7-215ENST00000639629 C1QL2Q7Z5L3 287 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 GGNQ86UU5 652 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 ANKLE2Q86XL3 938 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 SLC41A1Q8IVJ1 513 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 MZB1Q8WU39 189 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 PLCD4Q9BRC7 762 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 PDCD2LQ9BRP1 358 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 PCED1AQ9H1Q7 454 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 ADAMTS10Q9H324 1103 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 RC3H2Q9HBD1 1191 aaKnown RBP0.75□□□□□ -2.29
CCDC7-215ENST00000639629 NGRNQ9NPE2 291 aaKnown RBP0.75□□□□□ -2.29
CCDC7-215ENST00000639629 KCTD3Q9Y597 815 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 MATN2O00339 956 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 NPTXRO95502 500 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 LTKP29376 864 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 NFKBIBQ15653 356 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 RPTNQ6XPR3 784 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 KANSL1Q7Z3B3 1105 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 VTI1AQ96AJ9 217 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 TCTN2Q96GX1 697 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 PARP2Q9UGN5 583 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 CLEC18AA5D8T8 446 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 MARCH11A6NNE9 402 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 LGR5O75473 907 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 ITGB6P18564 788 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 ITGAEP38570 1179 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 CRKP46108 304 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 ZC3H6P61129 1189 aaKnown RBP0.75□□□□□ -2.29
CCDC7-215ENST00000639629 IQCEQ6IPM2 695 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 CLEC18CQ8NCF0 446 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 PRDM14Q9GZV8 571 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 CARS2Q9HA77 564 aaKnown RBP0.75□□□□□ -2.29
CCDC7-215ENST00000639629 H3BRB1 525 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 MTSS1O43312 755 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 KLHL18O94889 574 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 ZNF20P17024 532 aa0.75□□□□□ -2.29
CCDC7-215ENST00000639629 TPP2P29144 1249 aaPredicted RBP0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms