RNA–Protein interactions for RNA: ENST00000639482.1

SPIN3-222, Transcript of spindlin family member 3, human

TSL 3

Gene SPIN3, Length 3,719 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-222	ENST00000639482	RNASE9	P60153	205 aa	Known RBP	11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	SHISA4	Q96DD7	197 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	BRMS1	Q9HCU9	246 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	USP17L12	C9JPN9	530 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	USP17L21	D6R901	530 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	MYBL2	P10244	700 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	ARHGAP25	P42331	645 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	STIM1	Q13586	685 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	PRR5L	Q6MZQ0	368 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	TRIML1	Q8N9V2	468 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	FAM107B	Q9H098	131 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	SAMM50	Q9Y512	469 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482	ZNF804B	A4D1E1	1349 aa		11.27	□□□□□ -0.61
SPIN3-222	ENST00000639482		B4DLN1	442 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	IDE	P14735	1019 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	EZH2	Q15910	746 aa	Known RBP	11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	KRT26	Q7Z3Y9	468 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	PACS2	Q86VP3	889 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	PROM2	Q8N271	834 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	CNNM2	Q9H8M5	875 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	EHD2	Q9NZN4	543 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	TRPC5	Q9UL62	973 aa	Predicted RBP	11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	SAR1B	Q9Y6B6	198 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	FAM237A	A0A1B0GTK4	181 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	ADAMTS3	O15072	1205 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	MYO1B	O43795	1136 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	STAT6	P42226	847 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	PRCP	P42785	496 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	FAM71B	Q8TC56	605 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	JAKMIP2	Q96AA8	810 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	NAA15	Q9BXJ9	866 aa	Known RBP	11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	AGPAT5	Q9NUQ2	364 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	MYH7	P12883	1935 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	XDH	P47989	1333 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	SPATA31A6	Q5VVP1	1343 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	RIMBP2	O15034	1052 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	ATP2B2	Q01814	1243 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	UBE4A	Q14139	1066 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	WHAMMP3	Q1A5X7	153 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	CCDC96	Q2M329	555 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	KCTD16	Q68DU8	428 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	CATIP	Q7Z7H3	387 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	IQUB	Q8NA54	791 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	LACRT	Q9GZZ8	138 aa		11.26	□□□□□ -0.61
SPIN3-222	ENST00000639482	GYS1	P13807	737 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	MSANTD4	Q8NCY6	345 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	RIOK1	Q9BRS2	568 aa	Known RBP	11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	CENPH	Q9H3R5	247 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482		F8W031	263 aa	Predicted RBP	11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	PMS1	P54277	932 aa	Known RBP	11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	PTPRO	Q16827	1216 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	TCP11X2	Q5H9J9	407 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	UIMC1	Q96RL1	719 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	NYX	Q9GZU5	481 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	ZEB2	O60315	1214 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	SERPINB2	P05120	415 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	PARP1	P09874	1014 aa	Known RBP	11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	USP17L8	P0C7I0	530 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	ATP1A2	P50993	1020 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	CCDC178	Q5BJE1	867 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	NT5DC1	Q5TFE4	455 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	CDKAL1	Q5VV42	579 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	ESR2	Q92731	530 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	HPS3	Q969F9	1004 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	GSDMA	Q96QA5	445 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	RAB21	Q9UL25	225 aa		11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	REXO2	Q9Y3B8	237 aa	Known RBP	11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	COL5A3	P25940	1745 aa	Predicted RBP	11.25	□□□□□ -0.61
SPIN3-222	ENST00000639482	DDR1	Q08345	913 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	SLC10A5	Q5PT55	438 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	RC3H1	Q5TC82	1133 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	KRT27	Q7Z3Y8	459 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	OR8K1	Q8NGG5	319 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	NSUN4	Q96CB9	384 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	DYNLL2	Q96FJ2	89 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	GOLGA6C	A6NDK9	693 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	GOLGA6D	P0CG33	693 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	SLURP2	P0DP57	97 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	MTIF2	P46199	727 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	SLC44A5	Q8NCS7	719 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	HDAC7	Q8WUI4	952 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	RPGR	Q92834	1020 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	MXD3	Q9BW11	206 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	GOLGA6A	Q9NYA3	693 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	SAP30BP	Q9UHR5	308 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	RCCD1	A6NED2	376 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	RPN1	P04843	607 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	GPSM2	P81274	684 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	FBXO33	Q7Z6M2	555 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	ENAH	Q8N8S7	591 aa	Predicted RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	RRP36	Q96EU6	259 aa	Known RBP	11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	MTR	Q99707	1265 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	DEF6	Q9H4E7	631 aa		11.24	□□□□□ -0.61
SPIN3-222	ENST00000639482	WDR19	Q8NEZ3	1342 aa		11.23	□□□□□ -0.61
SPIN3-222	ENST00000639482	TULP1	O00294	542 aa	Predicted RBP	11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms