RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 OXCT1P55809 520 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CBX3Q13185 183 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 MAB21L3Q8N8X9 362 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 USP38Q8NB14 1042 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 SNX27Q96L92 541 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 GALNT8Q9NY28 637 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 SCHIP1Q9P0W5 487 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CHMLP26374 656 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ESX1Q8N693 406 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 SLAIN1Q8ND83 568 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 PRPF18Q99633 342 aaKnown RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 MRPL9Q9BYD2 267 aaKnown RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 PARP2Q9UGN5 583 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 hCG_1984214I3L0E3 225 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ZBTB39O15060 712 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 EIF2S1P05198 315 aaKnown RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ZFYP08048 801 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ATF3P18847 181 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 PRKAR2BP31323 418 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 UBA7P41226 1012 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CHMP4BP1P59074 171 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 WDR44Q5JSH3 913 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 HABP4Q5JVS0 413 aaKnown RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 VPS36Q86VN1 386 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 FAM200AQ8TCP9 573 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CFAP57Q96MR6 1250 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 TMEM5Q9Y2B1 443 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CEP162Q5TB80 1403 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 KIF7Q2M1P5 1343 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 MYH2Q9UKX2 1941 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ATP9BO43861 1147 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ZSCAN22P10073 491 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 MCM2P49736 904 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 LIG3P49916 1009 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 PDE6CP51160 858 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 KRT83P78385 493 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 SNX21Q969T3 373 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 SMC6Q96SB8 1091 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 XAB2Q9HCS7 855 aaKnown RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ZBTB43O43298 467 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CSPG5O95196 566 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 DPYSQ14117 519 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 INO80DQ53TQ3 878 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 THEMIS2Q5TEJ8 643 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 PI16Q6UXB8 463 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 SYT2Q8N9I0 419 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ZBTB8BQ8NAP8 495 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 OSBP2Q969R2 916 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 OTUD5Q96G74 571 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ALG1Q9BT22 464 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 FSD1Q9BTV5 496 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ANO2Q9NQ90 1003 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CCPG1Q9ULG6 757 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 TTC7AQ9ULT0 858 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-209ENST00000639244 CD2APQ9Y5K6 639 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 FLOT1O75955 427 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 MTX1Q13505 466 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 PCNX4Q63HM2 1172 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 PDXDC2PQ6P474 469 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 FAM186BQ8IYM0 893 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 LILRB2Q8N423 598 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 MAIP1Q8WWC4 291 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 COG8Q96MW5 612 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 ANKRD12Q6UB98 2062 aa4.74□□□□□ -1.65
SCN3A-209ENST00000639244 EXTL3O43909 919 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 URI1O94763 535 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 PTGS2P35354 604 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 GPSM2P81274 684 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 LURAP1LQ8IV03 231 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 IFNL2Q8IZJ0 200 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 GFM2Q969S9 779 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 ANKRD27Q96NW4 1050 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 ADAM21Q9UKJ8 722 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 ZNF510Q9Y2H8 683 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 TMEM247A6NEH6 219 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 PSMD14O00487 310 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 KRT71Q3SY84 523 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 RELTQ969Z4 430 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 RBM14Q96PK6 669 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 TCF12Q99081 682 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 OSBPL3Q9H4L5 887 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 RRP7AQ9Y3A4 280 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 BAZ1AQ9NRL2 1556 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 SRGAP3O43295 1099 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 BUB1BO60566 1050 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 TSC22D2O75157 780 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 KRT20P35900 424 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 ITGB3BPQ13352 177 aaPredicted RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 HLTFQ14527 1009 aaKnown RBP eCLIP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 NDUFA5Q16718 116 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 CCDC14Q49A88 953 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 SGCDQ92629 289 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 RIOK1Q9BRS2 568 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 EDEM3Q9BZQ6 932 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 VPS33BQ9H267 617 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 TYW1Q9NV66 732 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 CAP2P40123 477 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 TUFMP49411 452 aaKnown RBP4.73□□□□□ -1.65
SCN3A-209ENST00000639244 KMT5BQ4FZB7 885 aa4.73□□□□□ -1.65
SCN3A-209ENST00000639244 BRDTQ58F21 947 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms