RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SHHQ15465 462 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 C9orf50Q5SZB4 431 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 RASGRP2Q7LDG7 609 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 FAM160B2Q86V87 743 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 KLHDC9Q8NEP7 349 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 CHURC1Q8WUH1 139 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 STAG1Q8WVM7 1258 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 TSEN34Q9BSV6 310 aaKnown RBP19.99■□□□□ 0.79
SMN2-216ENST00000638794 STXBP5LQ9Y2K9 1186 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 ZNF536O15090 1300 aa19.99■□□□□ 0.79
SMN2-216ENST00000638794 MYADML2A6NDP7 307 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 POTEB2H3BUK9 544 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 ADCY6O43306 1168 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 PQBP1O60828 265 aaKnown RBP19.98■□□□□ 0.79
SMN2-216ENST00000638794 DUSP11O75319 330 aaKnown RBP19.98■□□□□ 0.79
SMN2-216ENST00000638794 CLTBP09497 229 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 ITGB8P26012 769 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 ACLYP53396 1101 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 KCTD1Q719H9 257 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 ARMCX2Q7L311 632 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 ABHD16BQ9H3Z7 469 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 ACAD9Q9H845 621 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 HELLSQ9NRZ9 838 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 ANAPC4Q9UJX5 808 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 EYSQ5T1H1 3165 aa19.98■□□□□ 0.79
SMN2-216ENST00000638794 RANBP6O60518 1105 aaKnown RBP19.97■□□□□ 0.79
SMN2-216ENST00000638794 CNTN2Q02246 1040 aa19.97■□□□□ 0.79
SMN2-216ENST00000638794 CCDC144BQ3MJ40 725 aa19.97■□□□□ 0.79
SMN2-216ENST00000638794 CCSAPQ6IQ19 270 aaPredicted RBP19.97■□□□□ 0.79
SMN2-216ENST00000638794 CCDC144CPQ8IYA2 1237 aa19.97■□□□□ 0.79
SMN2-216ENST00000638794 FAM227BQ96M60 508 aa19.97■□□□□ 0.79
SMN2-216ENST00000638794 STARD7Q9NQZ5 370 aa19.97■□□□□ 0.79
SMN2-216ENST00000638794 RNF146Q9NTX7 359 aa19.97■□□□□ 0.79
SMN2-216ENST00000638794 A0A0D9SFI3 127 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 MOXD2PA6NHM9 499 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 PLA2G6O60733 806 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 IRX5P78411 483 aaPredicted RBP19.96■□□□□ 0.79
SMN2-216ENST00000638794 KCNA10Q16322 511 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 FAM109BQ6ICB4 259 aaPredicted RBP19.96■□□□□ 0.79
SMN2-216ENST00000638794 RCSD1Q6JBY9 416 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 FAM133AQ8N9E0 248 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 NUP133Q8WUM0 1156 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 KATNBL1Q9H079 304 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 A1CFQ9NQ94 594 aaKnown RBP19.96■□□□□ 0.79
SMN2-216ENST00000638794 LRRC37A2A6NM11 1700 aa19.96■□□□□ 0.79
SMN2-216ENST00000638794 KIAA0355O15063 1070 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 ORC4O43929 436 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 C6orf222P0C671 652 aaPredicted RBP19.95■□□□□ 0.78
SMN2-216ENST00000638794 CST5P28325 142 aaPredicted RBP19.95■□□□□ 0.78
SMN2-216ENST00000638794 NOVP48745 357 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 SNAP25P60880 206 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 ALX1Q15699 326 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 CCDC174Q6PII3 467 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 ANKRD33Q7Z3H0 272 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 PRR12Q9ULL5 1215 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 MTMR7Q9Y216 660 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 LCTP09848 1927 aa19.95■□□□□ 0.78
SMN2-216ENST00000638794 FGAP02671 866 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 FGRP09769 529 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 ALAS1P13196 640 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 RAG1P15918 1043 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 FAAP100Q0VG06 881 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 MCMDC2Q4G0Z9 681 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 FAM161BQ96MY7 647 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 TOX2Q96NM4 488 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 GUCD1Q96NT3 240 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 TRERF1Q96PN7 1200 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 UPF3AQ9H1J1 476 aaKnown RBP19.94■□□□□ 0.78
SMN2-216ENST00000638794 TMEM39AQ9NV64 488 aa19.94■□□□□ 0.78
SMN2-216ENST00000638794 SOWAHBA6NEL2 793 aa19.93■□□□□ 0.78
SMN2-216ENST00000638794 ASGR1P07306 291 aa19.93■□□□□ 0.78
SMN2-216ENST00000638794 EPHB4P54760 987 aa19.93■□□□□ 0.78
SMN2-216ENST00000638794 GJA9P57773 515 aa19.93■□□□□ 0.78
SMN2-216ENST00000638794 ZNF589Q86UQ0 364 aaPredicted RBP19.93■□□□□ 0.78
SMN2-216ENST00000638794 PCSK9Q8NBP7 692 aaKnown RBP19.93■□□□□ 0.78
SMN2-216ENST00000638794 GLT1D1Q96MS3 346 aa19.93■□□□□ 0.78
SMN2-216ENST00000638794 LNPKQ9C0E8 428 aa19.93■□□□□ 0.78
SMN2-216ENST00000638794 SPC25Q9HBM1 224 aa19.93■□□□□ 0.78
SMN2-216ENST00000638794 TOMM22Q9NS69 142 aa19.93■□□□□ 0.78
SMN2-216ENST00000638794 DCDC2CA8MYV0 355 aa19.92■□□□□ 0.78
SMN2-216ENST00000638794 HSPD1P10809 573 aaKnown RBP19.92■□□□□ 0.78
SMN2-216ENST00000638794 NMIQ13287 307 aaPredicted RBP19.92■□□□□ 0.78
SMN2-216ENST00000638794 CCDC96Q2M329 555 aa19.92■□□□□ 0.78
SMN2-216ENST00000638794 MUM1L1Q5H9M0 696 aa19.92■□□□□ 0.78
SMN2-216ENST00000638794 RRP12Q5JTH9 1297 aaKnown RBP19.92■□□□□ 0.78
SMN2-216ENST00000638794 ZNF697Q5TEC3 545 aa19.92■□□□□ 0.78
SMN2-216ENST00000638794 DCAF4Q8WV16 495 aa19.92■□□□□ 0.78
SMN2-216ENST00000638794 ASTN1O14525 1302 aa19.92■□□□□ 0.78
SMN2-216ENST00000638794 ELP1O95163 1332 aa19.92■□□□□ 0.78
SMN2-216ENST00000638794 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.91■□□□□ 0.78
SMN2-216ENST00000638794 CTAGE5O15320 804 aa19.91■□□□□ 0.78
SMN2-216ENST00000638794 GNASQ5JWF2 1037 aa19.91■□□□□ 0.78
SMN2-216ENST00000638794 TICAM2Q86XR7 235 aa19.91■□□□□ 0.78
SMN2-216ENST00000638794 CCPG1Q9ULG6 757 aa19.91■□□□□ 0.78
SMN2-216ENST00000638794 DDX49Q9Y6V7 483 aaKnown RBP19.91■□□□□ 0.78
SMN2-216ENST00000638794 ZMYM6O95789 1325 aa19.91■□□□□ 0.78
SMN2-216ENST00000638794 ASB14A6NK59 587 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms