RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 CCDC82Q8N4S0 544 aa22.55■■□□□ 1.2
HLA-A-209ENST00000638375 GPRC5AQ8NFJ5 357 aa22.55■■□□□ 1.2
HLA-A-209ENST00000638375 RAVER2Q9HCJ3 691 aaKnown RBP22.55■■□□□ 1.2
HLA-A-209ENST00000638375 COL11A1P12107 1806 aaPredicted RBP22.54■■□□□ 1.2
HLA-A-209ENST00000638375 CCDC196A0A1B0GTZ2 297 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 ATP2A1O14983 1001 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 FOXN1O15353 648 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 TAL1P17542 331 aaPredicted RBP22.54■■□□□ 1.2
HLA-A-209ENST00000638375 PLS1Q14651 629 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 CPXCR1Q8N123 301 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 NECAB1Q8N987 351 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 GTF3C6Q969F1 213 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 PIGSQ96S52 555 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 SPATC1LQ9H0A9 340 aa22.54■■□□□ 1.2
HLA-A-209ENST00000638375 CTDP1Q9Y5B0 961 aaPredicted RBP22.54■■□□□ 1.2
HLA-A-209ENST00000638375 OAZ1P54368 228 aa22.53■■□□□ 1.2
HLA-A-209ENST00000638375 QRICH1Q2TAL8 776 aa22.53■■□□□ 1.2
HLA-A-209ENST00000638375 NOM1Q5C9Z4 860 aaKnown RBP22.53■■□□□ 1.2
HLA-A-209ENST00000638375 PIBF1Q8WXW3 757 aa22.53■■□□□ 1.2
HLA-A-209ENST00000638375 AGBL1Q96MI9 1066 aa22.53■■□□□ 1.2
HLA-A-209ENST00000638375 MOV10L1Q9BXT6 1211 aaKnown RBP22.53■■□□□ 1.2
HLA-A-209ENST00000638375 STAT3P40763 770 aa22.52■■□□□ 1.2
HLA-A-209ENST00000638375 SP3Q02447 781 aa22.52■■□□□ 1.2
HLA-A-209ENST00000638375 SNRNP48Q6IEG0 339 aaKnown RBP22.52■■□□□ 1.2
HLA-A-209ENST00000638375 HOMER1Q86YM7 354 aa22.52■■□□□ 1.2
HLA-A-209ENST00000638375 RIOX2Q8IUF8 465 aa22.52■■□□□ 1.2
HLA-A-209ENST00000638375 ZSCAN31Q96LW9 406 aaPredicted RBP22.52■■□□□ 1.2
HLA-A-209ENST00000638375 TEX13BQ9BXU2 312 aa22.52■■□□□ 1.2
HLA-A-209ENST00000638375 PORCNQ9H237 461 aa22.52■■□□□ 1.2
HLA-A-209ENST00000638375 RIPK3Q9Y572 518 aa22.52■■□□□ 1.2
HLA-A-209ENST00000638375 ZBTB5O15062 677 aa22.51■■□□□ 1.19
HLA-A-209ENST00000638375 PPP1R11O60927 126 aaPredicted RBP22.51■■□□□ 1.19
HLA-A-209ENST00000638375 ICAM1P05362 532 aa22.51■■□□□ 1.19
HLA-A-209ENST00000638375 HSPA8P11142 646 aaKnown RBP22.51■■□□□ 1.19
HLA-A-209ENST00000638375 IFNAR1P17181 557 aa22.51■■□□□ 1.19
HLA-A-209ENST00000638375 MCM2P49736 904 aa22.51■■□□□ 1.19
HLA-A-209ENST00000638375 ZNF296Q8WUU4 475 aaPredicted RBP22.51■■□□□ 1.19
HLA-A-209ENST00000638375 SH2B1Q9NRF2 756 aaPredicted RBP22.51■■□□□ 1.19
HLA-A-209ENST00000638375 BAZ2BQ9UIF8 2168 aaKnown RBP22.5■■□□□ 1.19
HLA-A-209ENST00000638375 hCG_1642624A0A1W2PR95 340 aa22.5■■□□□ 1.19
HLA-A-209ENST00000638375 PPFIA3O75145 1194 aa22.5■■□□□ 1.19
HLA-A-209ENST00000638375 CTGFP29279 349 aa22.5■■□□□ 1.19
HLA-A-209ENST00000638375 CAP1Q01518 475 aa22.5■■□□□ 1.19
HLA-A-209ENST00000638375 PHKBQ93100 1093 aa22.5■■□□□ 1.19
HLA-A-209ENST00000638375 RRP36Q96EU6 259 aaKnown RBP22.5■■□□□ 1.19
HLA-A-209ENST00000638375 EFCC1Q9HA90 598 aa22.5■■□□□ 1.19
HLA-A-209ENST00000638375 CCPG1Q9ULG6 757 aa22.5■■□□□ 1.19
HLA-A-209ENST00000638375 PNMA6FA0A0J9YX94 578 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 CPLX1O14810 134 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 DTNBO60941 627 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 FKTNO75072 461 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 ECM2O94769 699 aaPredicted RBP22.49■■□□□ 1.19
HLA-A-209ENST00000638375 CTDNEP1O95476 244 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 ERCC3P19447 782 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 SLC4A3P48751 1232 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 CCNA1P78396 465 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 LACTBP83111 547 aaPredicted RBP22.49■■□□□ 1.19
HLA-A-209ENST00000638375 CCDC83Q8IWF9 413 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 SHCBP1Q8NEM2 672 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 TMX3Q96JJ7 454 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 ARHGAP39Q9C0H5 1083 aa22.49■■□□□ 1.19
HLA-A-209ENST00000638375 V9GY48 417 aaPredicted RBP22.49■■□□□ 1.19
HLA-A-209ENST00000638375 NCAPG2Q86XI2 1143 aa22.48■■□□□ 1.19
HLA-A-209ENST00000638375 FBXO11Q86XK2 927 aa22.48■■□□□ 1.19
HLA-A-209ENST00000638375 CD99L2Q8TCZ2 262 aa22.48■■□□□ 1.19
HLA-A-209ENST00000638375 PRPF3O43395 683 aaKnown RBP22.47■■□□□ 1.19
HLA-A-209ENST00000638375 SLC25A27O95847 323 aa22.47■■□□□ 1.19
HLA-A-209ENST00000638375 ALAS1P13196 640 aa22.47■■□□□ 1.19
HLA-A-209ENST00000638375 CTCFP49711 727 aaPredicted RBP22.47■■□□□ 1.19
HLA-A-209ENST00000638375 USH1GQ495M9 461 aa22.47■■□□□ 1.19
HLA-A-209ENST00000638375 CPLX2Q6PUV4 134 aaKnown RBP22.47■■□□□ 1.19
HLA-A-209ENST00000638375 SNX21Q969T3 373 aa22.47■■□□□ 1.19
HLA-A-209ENST00000638375 AMNQ9BXJ7 453 aa22.47■■□□□ 1.19
HLA-A-209ENST00000638375 SLC26A6Q9BXS9 759 aa22.47■■□□□ 1.19
HLA-A-209ENST00000638375 RNF26Q9BY78 433 aaPredicted RBP22.47■■□□□ 1.19
HLA-A-209ENST00000638375 HOMER2Q9NSB8 354 aa22.47■■□□□ 1.19
HLA-A-209ENST00000638375 SEC63Q9UGP8 760 aaKnown RBP22.47■■□□□ 1.19
HLA-A-209ENST00000638375 ZSWIM8A7E2V4 1837 aa22.47■■□□□ 1.19
HLA-A-209ENST00000638375 FMNL1O95466 1100 aaPredicted RBP22.46■■□□□ 1.19
HLA-A-209ENST00000638375 MAPK4P31152 587 aa22.46■■□□□ 1.19
HLA-A-209ENST00000638375 COPB2P35606 906 aa22.46■■□□□ 1.19
HLA-A-209ENST00000638375 PKN1Q16512 942 aa22.46■■□□□ 1.19
HLA-A-209ENST00000638375 TKFCQ3LXA3 575 aa22.46■■□□□ 1.19
HLA-A-209ENST00000638375 NSUN7Q8NE18 718 aaKnown RBP22.46■■□□□ 1.19
HLA-A-209ENST00000638375 RNF146Q9NTX7 359 aa22.46■■□□□ 1.19
HLA-A-209ENST00000638375 PNMA2Q9UL42 364 aa22.46■■□□□ 1.19
HLA-A-209ENST00000638375 CDKL5O76039 1030 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 PSMC4P43686 418 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 LBX1P52954 281 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 MUM1L1Q5H9M0 696 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 WDR78Q5VTH9 848 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 GPR142Q7Z601 462 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 CLEC4DQ8WXI8 215 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 COA7Q96BR5 231 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 ERO1AQ96HE7 468 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 TRIM47Q96LD4 638 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 TRERF1Q96PN7 1200 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 MROH8Q9H579 483 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 PCDHA1Q9Y5I3 950 aa22.45■■□□□ 1.18
HLA-A-209ENST00000638375 SMCHD1A6NHR9 2005 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms