RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 USP17L19D6RCP7 530 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 USP17L20D6RJB6 530 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 FIBPO43427 364 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 ZBED4O75132 1171 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 VCAM1P19320 739 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 COPB2P35606 906 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 USP17L24Q0WX57 530 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 FSTL1Q12841 308 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 SPP2Q13103 211 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 MTMR2Q13614 643 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 STK38Q15208 465 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 NONOQ15233 471 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00598-216ENST00000638163 QRICH1Q2TAL8 776 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 FAM83BQ5T0W9 1011 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.81□□□□□ -0.52
LINC00598-216ENST00000638163 FASTKD5Q7L8L6 764 aaKnown RBP11.81□□□□□ -0.52
LINC00598-216ENST00000638163 MCF2L2Q86YR7 1114 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 LEO1Q8WVC0 666 aaPredicted RBP11.81□□□□□ -0.52
LINC00598-216ENST00000638163 PYM1Q9BRP8 204 aaKnown RBP11.81□□□□□ -0.52
LINC00598-216ENST00000638163 UBA5Q9GZZ9 404 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 LMBRD1Q9NUN5 540 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 HOXC10Q9NYD6 342 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 PRR12Q9ULL5 1215 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 KCNJ14Q9UNX9 436 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 KCNH4Q9UQ05 1017 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 PCDHA1Q9Y5I3 950 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 SNCAIPQ9Y6H5 919 aa11.81□□□□□ -0.52
LINC00598-216ENST00000638163 DDX49Q9Y6V7 483 aaKnown RBP11.81□□□□□ -0.52
LINC00598-216ENST00000638163 A0A1W2PQ27 194 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 A0A1W2PQ64 194 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 A0A1W2PQD8 194 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 PIK3CDO00329 1044 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 ATP2A1O14983 1001 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 SPTLC2O15270 562 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
LINC00598-216ENST00000638163 LETM1O95202 739 aaPredicted RBP11.8□□□□□ -0.52
LINC00598-216ENST00000638163 ICAM1P05362 532 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 GCFC2P16383 781 aaKnown RBP11.8□□□□□ -0.52
LINC00598-216ENST00000638163 SLC39A14Q15043 492 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 TKFCQ3LXA3 575 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 LDLRAD1Q5T700 205 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 SPICE1Q8N0Z3 855 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 C2orf69Q8N8R5 385 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 SMC1BQ8NDV3 1235 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 TNFRSF25Q93038 417 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 ZKSCAN4Q969J2 545 aaPredicted RBP11.8□□□□□ -0.52
LINC00598-216ENST00000638163 FERMT2Q96AC1 680 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 CCDC34Q96HJ3 373 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 TANGO6Q9C0B7 1094 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 PSTPIP2Q9H939 334 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 VAT1LQ9HCJ6 419 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 PPP1R9AQ9ULJ8 1098 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 CNPY2Q9Y2B0 182 aa11.8□□□□□ -0.52
LINC00598-216ENST00000638163 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 M0R2N6 131 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 TRAK2O60296 914 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 PPFIA3O75145 1194 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 FLOT1O75955 427 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 SLURP2P0DP57 97 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 HOXA7P31268 230 aaPredicted RBP11.79□□□□□ -0.52
LINC00598-216ENST00000638163 FOSBP53539 338 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 COG2Q14746 738 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 NPY5RQ15761 445 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 SHROOM1Q2M3G4 852 aaPredicted RBP11.79□□□□□ -0.52
LINC00598-216ENST00000638163 SLC35G1Q2M3R5 365 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 ARL6IP4Q66PJ3 421 aaKnown RBP11.79□□□□□ -0.52
LINC00598-216ENST00000638163 ADALQ6DHV7 355 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 OTUD7BQ6GQQ9 843 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 TTBK2Q6IQ55 1244 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 MOXD1Q6UVY6 613 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
LINC00598-216ENST00000638163 LINC00301Q8NCQ3 95 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 GPKOWQ92917 476 aaPredicted RBP eCLIP11.79□□□□□ -0.52
LINC00598-216ENST00000638163 USP28Q96RU2 1077 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 GLIS2Q9BZE0 524 aaPredicted RBP11.79□□□□□ -0.52
LINC00598-216ENST00000638163 RPAP3Q9H6T3 665 aaPredicted RBP11.79□□□□□ -0.52
LINC00598-216ENST00000638163 PNMA3Q9UL41 463 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 SLC45A1Q9Y2W3 748 aa11.79□□□□□ -0.52
LINC00598-216ENST00000638163 A0A0G2JLL6 359 aaPredicted RBP11.78□□□□□ -0.52
LINC00598-216ENST00000638163 POTEIP0CG38 1075 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 POTEJP0CG39 1038 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 ZBTB48P10074 688 aaPredicted RBP11.78□□□□□ -0.52
LINC00598-216ENST00000638163 SLC16A2P36021 539 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 PRPHP41219 470 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 ME1P48163 572 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 GHRHRQ02643 423 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 SNAPC2Q13487 334 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 TTC38Q5R3I4 469 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 LBX2Q6XYB7 198 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 PRRT2Q7Z6L0 340 aaPredicted RBP11.78□□□□□ -0.52
LINC00598-216ENST00000638163 NEK8Q86SG6 692 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 KIFC2Q96AC6 838 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 SLC38A10Q9HBR0 1119 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 GBA2Q9HCG7 927 aaPredicted RBP11.78□□□□□ -0.52
LINC00598-216ENST00000638163 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 DDX19AQ9NUU7 478 aaKnown RBP11.78□□□□□ -0.52
LINC00598-216ENST00000638163 PCDHA6Q9UN73 950 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 PCDHA8Q9Y5H6 950 aa11.78□□□□□ -0.52
LINC00598-216ENST00000638163 hCG_1642624A0A1W2PR95 340 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms