RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 HLA-DOAP06340 250 aa24.32■■□□□ 1.48
CLN6-224ENST00000638076 NAALADL2Q58DX5 795 aa24.32■■□□□ 1.48
CLN6-224ENST00000638076 PPP1R13BQ96KQ4 1090 aa24.32■■□□□ 1.48
CLN6-224ENST00000638076 BIN2Q9UBW5 565 aaPredicted RBP24.32■■□□□ 1.48
CLN6-224ENST00000638076 MYO3BQ8WXR4 1341 aa24.32■■□□□ 1.48
CLN6-224ENST00000638076 A0A1B0GTH6 734 aa24.32■■□□□ 1.48
CLN6-224ENST00000638076 RPN1P04843 607 aaKnown RBP24.32■■□□□ 1.48
CLN6-224ENST00000638076 NEK8Q86SG6 692 aa24.32■■□□□ 1.48
CLN6-224ENST00000638076 GPCPD1Q9NPB8 672 aa24.32■■□□□ 1.48
CLN6-224ENST00000638076 CDKAL1Q5VV42 579 aa24.31■■□□□ 1.48
CLN6-224ENST00000638076 APTXQ7Z2E3 356 aaKnown RBP24.31■■□□□ 1.48
CLN6-224ENST00000638076 REXO1Q8N1G1 1221 aaKnown RBP24.31■■□□□ 1.48
CLN6-224ENST00000638076 CCSER1Q9C0I3 900 aa24.31■■□□□ 1.48
CLN6-224ENST00000638076 RMND1Q9NWS8 449 aa24.31■■□□□ 1.48
CLN6-224ENST00000638076 ESYT2A0FGR8 921 aa24.3■■□□□ 1.48
CLN6-224ENST00000638076 hCG_1984214I3L0E3 225 aa24.3■■□□□ 1.48
CLN6-224ENST00000638076 OR52Z1P0C646 297 aa24.3■■□□□ 1.48
CLN6-224ENST00000638076 JAKMIP3Q5VZ66 844 aa24.3■■□□□ 1.48
CLN6-224ENST00000638076 KIAA0825Q8IV33 1275 aa24.3■■□□□ 1.48
CLN6-224ENST00000638076 ZNF713Q8N859 430 aaPredicted RBP24.3■■□□□ 1.48
CLN6-224ENST00000638076 TBCKQ8TEA7 893 aa24.3■■□□□ 1.48
CLN6-224ENST00000638076 MYH8P13535 1937 aa24.3■■□□□ 1.48
CLN6-224ENST00000638076 MPHOSPH10O00566 681 aaKnown RBP24.3■■□□□ 1.48
CLN6-224ENST00000638076 CTIFO43310 598 aaKnown RBP24.3■■□□□ 1.48
CLN6-224ENST00000638076 ZNF658Q5TYW1 1059 aaPredicted RBP24.3■■□□□ 1.48
CLN6-224ENST00000638076 COA7Q96BR5 231 aa24.3■■□□□ 1.48
CLN6-224ENST00000638076 COBLO75128 1261 aa24.29■■□□□ 1.48
CLN6-224ENST00000638076 SLURP2P0DP57 97 aa24.29■■□□□ 1.48
CLN6-224ENST00000638076 ZFPM1Q8IX07 1006 aa24.29■■□□□ 1.48
CLN6-224ENST00000638076 ZDHHC15Q96MV8 337 aa24.29■■□□□ 1.48
CLN6-224ENST00000638076 PLIN2Q99541 437 aa24.29■■□□□ 1.48
CLN6-224ENST00000638076 TMEM260Q9NX78 707 aa24.29■■□□□ 1.48
CLN6-224ENST00000638076 PCDHAC2Q9Y5I4 1007 aa24.29■■□□□ 1.48
CLN6-224ENST00000638076 H0YIN7 160 aa24.29■■□□□ 1.48
CLN6-224ENST00000638076 ZNF219Q9P2Y4 722 aaPredicted RBP24.29■■□□□ 1.48
CLN6-224ENST00000638076 ZNF543Q08ER8 600 aa24.28■■□□□ 1.48
CLN6-224ENST00000638076 TMEM139Q8IV31 216 aa24.28■■□□□ 1.48
CLN6-224ENST00000638076 KIF2AO00139 706 aaPredicted RBP24.28■■□□□ 1.48
CLN6-224ENST00000638076 TEX33O43247 280 aa24.28■■□□□ 1.48
CLN6-224ENST00000638076 CACNB3P54284 484 aa24.28■■□□□ 1.48
CLN6-224ENST00000638076 ATP2B2Q01814 1243 aa24.28■■□□□ 1.48
CLN6-224ENST00000638076 ZNF710Q8N1W2 664 aa24.28■■□□□ 1.48
CLN6-224ENST00000638076 AK8Q96MA6 479 aa24.28■■□□□ 1.48
CLN6-224ENST00000638076 RWDD2AQ9UIY3 292 aa24.28■■□□□ 1.48
CLN6-224ENST00000638076 ADKP55263 362 aaKnown RBP24.27■■□□□ 1.48
CLN6-224ENST00000638076 PAK1Q13153 545 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 STRIP1Q5VSL9 837 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 TC2NQ8N9U0 490 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 CTAGE1Q96RT6 745 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 EHD4Q9H223 541 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 PDCL3Q9H2J4 239 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 ADD3Q9UEY8 706 aaKnown RBP24.27■■□□□ 1.48
CLN6-224ENST00000638076 GDAQ9Y2T3 454 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 ECE2O60344 883 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 ADCY7P51828 1080 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 TCP10Q12799 353 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 STYK1Q6J9G0 422 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 CABP7Q86V35 215 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 ADGRF4Q8IZF3 695 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 JMJD4Q9H9V9 463 aa24.27■■□□□ 1.48
CLN6-224ENST00000638076 RBM5P52756 815 aaKnown RBP eCLIP24.26■■□□□ 1.47
CLN6-224ENST00000638076 KIF18AQ8NI77 898 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 LRRC15Q8TF66 581 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 NELFBQ8WX92 580 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 DNAJC18Q9H819 358 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 KBTBD4Q9NVX7 518 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 C10orf71Q711Q0 1435 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 CCP110O43303 1012 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 DACT2Q5SW24 774 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 TTBK2Q6IQ55 1244 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 BAG1Q99933 345 aaPredicted RBP24.26■■□□□ 1.47
CLN6-224ENST00000638076 MAPK8IP1Q9UQF2 711 aa24.26■■□□□ 1.47
CLN6-224ENST00000638076 ARHGAP6O43182 974 aa24.25■■□□□ 1.47
CLN6-224ENST00000638076 TECP42680 631 aa24.25■■□□□ 1.47
CLN6-224ENST00000638076 PRCPP42785 496 aa24.25■■□□□ 1.47
CLN6-224ENST00000638076 POTEDQ86YR6 584 aa24.25■■□□□ 1.47
CLN6-224ENST00000638076 MAP7D2Q96T17 732 aa24.25■■□□□ 1.47
CLN6-224ENST00000638076 MRIQ9BWK5 157 aa24.25■■□□□ 1.47
CLN6-224ENST00000638076 PNMA6FA0A0J9YX94 578 aa24.24■■□□□ 1.47
CLN6-224ENST00000638076 MYL1P05976 194 aa24.24■■□□□ 1.47
CLN6-224ENST00000638076 PLCG1P19174 1290 aa24.24■■□□□ 1.47
CLN6-224ENST00000638076 CHRNA5P30532 468 aa24.24■■□□□ 1.47
CLN6-224ENST00000638076 FKBP1AP62942 108 aaKnown RBP24.24■■□□□ 1.47
CLN6-224ENST00000638076 CCDC96Q2M329 555 aa24.24■■□□□ 1.47
CLN6-224ENST00000638076 ORC2Q13416 577 aaPredicted RBP24.24■■□□□ 1.47
CLN6-224ENST00000638076 KMT5BQ4FZB7 885 aa24.24■■□□□ 1.47
CLN6-224ENST00000638076 FILIP1LQ4L180 1135 aa24.24■■□□□ 1.47
CLN6-224ENST00000638076 GPATCH4Q5T3I0 446 aaKnown RBP24.24■■□□□ 1.47
CLN6-224ENST00000638076 CCDC17Q96LX7 622 aa24.24■■□□□ 1.47
CLN6-224ENST00000638076 DDTLA6NHG4 134 aaPredicted RBP24.23■■□□□ 1.47
CLN6-224ENST00000638076 FAM196BA6NMK8 535 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 SLC16A2P36021 539 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 KCNB1Q14721 858 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 KCTD1Q719H9 257 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 MTERF4Q7Z6M4 381 aaKnown RBP24.23■■□□□ 1.47
CLN6-224ENST00000638076 FCHSD1Q86WN1 690 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 DHX36Q9H2U1 1008 aaKnown RBP24.23■■□□□ 1.47
CLN6-224ENST00000638076 CUEDC2Q9H467 287 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 SLX4Q8IY92 1834 aa24.23■■□□□ 1.47
CLN6-224ENST00000638076 KLRC4O43908 158 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms