RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 ICAM1P05362 532 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 HSPA1AP0DMV8 641 aaKnown RBP25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 HSPA1BP0DMV9 641 aaKnown RBP25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 STAT3P40763 770 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 SP3Q02447 781 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 SCRN1Q12765 414 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 STK3Q13188 491 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 CDC37Q16543 378 aaPredicted RBP25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 Q3C1V9 767 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 RIOX2Q8IUF8 465 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 SHCBP1Q8NEM2 672 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 GTF3C6Q969F1 213 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 NCOA5Q9HCD5 579 aaKnown RBP25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 VAT1LQ9HCJ6 419 aa25.96■■□□□ 1.75
CHRNA7-231ENST00000637786 CNTNAP5Q8WYK1 1306 aa25.95■■□□□ 1.75
CHRNA7-231ENST00000637786 SLC25A27O95847 323 aa25.95■■□□□ 1.74
CHRNA7-231ENST00000637786 IFNAR1P17181 557 aa25.95■■□□□ 1.74
CHRNA7-231ENST00000637786 PLS1Q14651 629 aa25.95■■□□□ 1.74
CHRNA7-231ENST00000637786 NTRK3Q16288 839 aa25.95■■□□□ 1.74
CHRNA7-231ENST00000637786 CPLX2Q6PUV4 134 aaKnown RBP25.95■■□□□ 1.74
CHRNA7-231ENST00000637786 CMTR1Q8N1G2 835 aaKnown RBP25.95■■□□□ 1.74
CHRNA7-231ENST00000637786 RRP36Q96EU6 259 aaKnown RBP25.95■■□□□ 1.74
CHRNA7-231ENST00000637786 RAVER2Q9HCJ3 691 aaKnown RBP25.95■■□□□ 1.74
CHRNA7-231ENST00000637786 MGAMO43451 1857 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 PNMA6FA0A0J9YX94 578 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 CPLX1O14810 134 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 PEX10O60683 326 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 FKTNO75072 461 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 CD2BP2O95400 341 aaKnown RBP25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 LARGE1O95461 756 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 TRAF1Q13077 416 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 QRICH1Q2TAL8 776 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 SNRNP48Q6IEG0 339 aaKnown RBP25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 CPXCR1Q8N123 301 aa25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 MOV10L1Q9BXT6 1211 aaKnown RBP25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 RBM27Q9P2N5 1060 aaKnown RBP25.94■■□□□ 1.74
CHRNA7-231ENST00000637786 FOXN1O15353 648 aa25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 MAPK4P31152 587 aa25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 CTCFP49711 727 aaPredicted RBP25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 SNAP25P60880 206 aa25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 LACTBP83111 547 aaPredicted RBP25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 TKFCQ3LXA3 575 aa25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 CCDC174Q6PII3 467 aa25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 PIGSQ96S52 555 aa25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 MROH8Q9H579 483 aa25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 SEC63Q9UGP8 760 aaKnown RBP25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 TSKSQ9UJT2 592 aa25.93■■□□□ 1.74
CHRNA7-231ENST00000637786 SMCHD1A6NHR9 2005 aa25.92■■□□□ 1.74
CHRNA7-231ENST00000637786 CDKL5O76039 1030 aa25.92■■□□□ 1.74
CHRNA7-231ENST00000637786 CCDC82Q8N4S0 544 aa25.92■■□□□ 1.74
CHRNA7-231ENST00000637786 ZNF296Q8WUU4 475 aaPredicted RBP25.92■■□□□ 1.74
CHRNA7-231ENST00000637786 AMNQ9BXJ7 453 aa25.92■■□□□ 1.74
CHRNA7-231ENST00000637786 RNF26Q9BY78 433 aaPredicted RBP25.92■■□□□ 1.74
CHRNA7-231ENST00000637786 CCPG1Q9ULG6 757 aa25.92■■□□□ 1.74
CHRNA7-231ENST00000637786 HSPA8P11142 646 aaKnown RBP25.91■■□□□ 1.74
CHRNA7-231ENST00000637786 KIF22Q14807 665 aa25.91■■□□□ 1.74
CHRNA7-231ENST00000637786 FBXO11Q86XK2 927 aa25.91■■□□□ 1.74
CHRNA7-231ENST00000637786 HOMER1Q86YM7 354 aa25.91■■□□□ 1.74
CHRNA7-231ENST00000637786 SNX21Q969T3 373 aa25.91■■□□□ 1.74
CHRNA7-231ENST00000637786 ERO1AQ96HE7 468 aa25.91■■□□□ 1.74
CHRNA7-231ENST00000637786 AGBL1Q96MI9 1066 aa25.91■■□□□ 1.74
CHRNA7-231ENST00000637786 PORCNQ9H237 461 aa25.91■■□□□ 1.74
CHRNA7-231ENST00000637786 PRPF3O43395 683 aaKnown RBP25.9■■□□□ 1.74
CHRNA7-231ENST00000637786 ERCC3P19447 782 aa25.9■■□□□ 1.74
CHRNA7-231ENST00000637786 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.9■■□□□ 1.74
CHRNA7-231ENST00000637786 CCAR1Q8IX12 1150 aaKnown RBP25.9■■□□□ 1.74
CHRNA7-231ENST00000637786 NECAB1Q8N987 351 aa25.9■■□□□ 1.74
CHRNA7-231ENST00000637786 CHST13Q8NET6 341 aa25.9■■□□□ 1.74
CHRNA7-231ENST00000637786 FBXO40Q9UH90 709 aa25.9■■□□□ 1.74
CHRNA7-231ENST00000637786 RIPK3Q9Y572 518 aa25.9■■□□□ 1.74
CHRNA7-231ENST00000637786 FCGRTP55899 365 aa25.89■■□□□ 1.74
CHRNA7-231ENST00000637786 ARHGEF6Q15052 776 aa25.89■■□□□ 1.74
CHRNA7-231ENST00000637786 TRIM22Q8IYM9 498 aa25.89■■□□□ 1.74
CHRNA7-231ENST00000637786 TMX3Q96JJ7 454 aa25.89■■□□□ 1.74
CHRNA7-231ENST00000637786 V9GY48 417 aaPredicted RBP25.89■■□□□ 1.74
CHRNA7-231ENST00000637786 ABCB11O95342 1321 aa25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 DOCK3Q8IZD9 2030 aa25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 PPP1R11O60927 126 aaPredicted RBP25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 GNRH1P01148 92 aa25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 AKAP17AQ02040 695 aaKnown RBP25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 NCAPG2Q86XI2 1143 aa25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 LLPHQ9BRT6 129 aaKnown RBP25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 MAF1Q9H063 256 aa25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 EFCC1Q9HA90 598 aa25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 STK36Q9NRP7 1315 aa25.88■■□□□ 1.73
CHRNA7-231ENST00000637786 hCG_1984214I3L0E3 225 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 STRNO43815 780 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 FMNL1O95466 1100 aaPredicted RBP25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 ALAS1P13196 640 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 PSMC4P43686 418 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 SSRP1Q08945 709 aaKnown RBP25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 ST3GAL1Q11201 340 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 ABRAQ8N0Z2 381 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 ZNF713Q8N859 430 aaPredicted RBP25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 PHKBQ93100 1093 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 TRERF1Q96PN7 1200 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 ACAD9Q9H845 621 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 RNF146Q9NTX7 359 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 PCDHA1Q9Y5I3 950 aa25.87■■□□□ 1.73
CHRNA7-231ENST00000637786 CASP8AP2Q9UKL3 1982 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms