RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 POTECB2RU33 542 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 USP17L10C9JJH3 530 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 M0R2N6 131 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 PTPRAP18433 802 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 SLC16A2P36021 539 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 STK38Q15208 465 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 C12orf42Q96LP6 360 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
CLN6-219ENST00000637329 BEGAINQ9BUH8 593 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 VAT1LQ9HCJ6 419 aa17.59■□□□□ 0.41
CLN6-219ENST00000637329 PPP6R2O75170 966 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 IREB2P48200 963 aaKnown RBP17.58■□□□□ 0.4
CLN6-219ENST00000637329 ADCY7P51828 1080 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 SLC39A14Q15043 492 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 QRICH1Q2TAL8 776 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 FAM83BQ5T0W9 1011 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 PRAMEF18Q5VWM3 479 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 KRT25Q7Z3Z0 450 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 SPICE1Q8N0Z3 855 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 ZNF280CQ8ND82 737 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 CDCA5Q96FF9 252 aa17.58■□□□□ 0.4
CLN6-219ENST00000637329 GLIS2Q9BZE0 524 aaPredicted RBP17.58■□□□□ 0.4
CLN6-219ENST00000637329 FTOQ9C0B1 505 aaKnown RBP eCLIP17.58■□□□□ 0.4
CLN6-219ENST00000637329 SMCO2A6NFE2 343 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 SPTLC2O15270 562 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 PPP1R11O60927 126 aaPredicted RBP17.57■□□□□ 0.4
CLN6-219ENST00000637329 GADD45BO75293 160 aaPredicted RBP17.57■□□□□ 0.4
CLN6-219ENST00000637329 USP2O75604 605 aaPredicted RBP17.57■□□□□ 0.4
CLN6-219ENST00000637329 SF3A1Q15459 793 aaKnown RBP17.57■□□□□ 0.4
CLN6-219ENST00000637329 MAP3K11Q16584 847 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 KIAA1755Q5JYT7 1200 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 MCTP2Q6DN12 878 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 REXO1Q8N1G1 1221 aaKnown RBP17.57■□□□□ 0.4
CLN6-219ENST00000637329 ZKSCAN4Q969J2 545 aaPredicted RBP17.57■□□□□ 0.4
CLN6-219ENST00000637329 AMNQ9BXJ7 453 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 RIC8AQ9NPQ8 531 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.57■□□□□ 0.4
CLN6-219ENST00000637329 PRR12Q9ULL5 1215 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 CSADQ9Y600 493 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 CLIC4Q9Y696 253 aa17.57■□□□□ 0.4
CLN6-219ENST00000637329 CCDC194A0A1B0GVG4 234 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 A0A1W2PQ27 194 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 A0A1W2PQ64 194 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 A0A1W2PQD8 194 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 TRIM75PA6NK02 468 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 C19orf81C9J6K1 198 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 ME1P48163 572 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 TOB1P50616 345 aaPredicted RBP17.56■□□□□ 0.4
CLN6-219ENST00000637329 BACE1P56817 501 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 MAP3K9P80192 1104 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 CEBPZQ03701 1054 aaKnown RBP17.56■□□□□ 0.4
CLN6-219ENST00000637329 MTMR2Q13614 643 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 PTPAQ15257 358 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 ZYXQ15942 572 aaKnown RBP17.56■□□□□ 0.4
CLN6-219ENST00000637329 DEFB115Q30KQ5 88 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 EAPPQ56P03 285 aaPredicted RBP17.56■□□□□ 0.4
CLN6-219ENST00000637329 CCDC84Q86UT8 332 aaPredicted RBP17.56■□□□□ 0.4
CLN6-219ENST00000637329 LDHDQ86WU2 507 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 FBXO11Q86XK2 927 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 CUL5Q93034 780 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 RANBP17Q9H2T7 1088 aaKnown RBP17.56■□□□□ 0.4
CLN6-219ENST00000637329 PCDHA6Q9UN73 950 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 PCDHA8Q9Y5H6 950 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 SNCAIPQ9Y6H5 919 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
CLN6-219ENST00000637329 LOC285556D6RIA3 1793 aa17.56■□□□□ 0.4
CLN6-219ENST00000637329 POLR2AP24928 1970 aaKnown RBP17.55■□□□□ 0.4
CLN6-219ENST00000637329 UNCXA6NJT0 531 aa17.55■□□□□ 0.4
CLN6-219ENST00000637329 FDX1P10109 184 aa17.55■□□□□ 0.4
CLN6-219ENST00000637329 HSPA8P11142 646 aaKnown RBP17.55■□□□□ 0.4
CLN6-219ENST00000637329 VCAM1P19320 739 aa17.55■□□□□ 0.4
CLN6-219ENST00000637329 ORC2Q13416 577 aaPredicted RBP17.55■□□□□ 0.4
CLN6-219ENST00000637329 VGLL4Q14135 290 aa17.55■□□□□ 0.4
CLN6-219ENST00000637329 PIK3AP1Q6ZUJ8 805 aa17.55■□□□□ 0.4
CLN6-219ENST00000637329 COA7Q96BR5 231 aa17.55■□□□□ 0.4
CLN6-219ENST00000637329 PGBD1Q96JS3 809 aa17.55■□□□□ 0.4
CLN6-219ENST00000637329 PNMA2Q9UL42 364 aa17.55■□□□□ 0.4
CLN6-219ENST00000637329 MRPL12P52815 198 aaKnown RBP17.54■□□□□ 0.4
CLN6-219ENST00000637329 NONOQ15233 471 aaKnown RBP eCLIP17.54■□□□□ 0.45e-7■■■□□ 18
CLN6-219ENST00000637329 SH3D19Q5HYK7 790 aa17.54■□□□□ 0.4
CLN6-219ENST00000637329 TTC38Q5R3I4 469 aa17.54■□□□□ 0.4
CLN6-219ENST00000637329 ADALQ6DHV7 355 aa17.54■□□□□ 0.4
CLN6-219ENST00000637329 CAVIN1Q6NZI2 390 aaKnown RBP17.54■□□□□ 0.4
CLN6-219ENST00000637329 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.54■□□□□ 0.4
CLN6-219ENST00000637329 ANKRD13AQ8IZ07 590 aa17.54■□□□□ 0.4
CLN6-219ENST00000637329 SLF1Q9BQI6 1058 aa17.54■□□□□ 0.4
CLN6-219ENST00000637329 PCDHA1Q9Y5I3 950 aa17.54■□□□□ 0.4
CLN6-219ENST00000637329 PARP14Q460N5 1801 aa17.54■□□□□ 0.4
CLN6-219ENST00000637329 CLK2P49760 499 aaKnown RBP17.53■□□□□ 0.4
CLN6-219ENST00000637329 SPP2Q13103 211 aa17.53■□□□□ 0.4
CLN6-219ENST00000637329 EARS2Q5JPH6 523 aaKnown RBP17.53■□□□□ 0.4
CLN6-219ENST00000637329 PRPF38AQ8NAV1 312 aaKnown RBP17.53■□□□□ 0.4
CLN6-219ENST00000637329 EMILIN3Q9NT22 766 aa17.53■□□□□ 0.4
CLN6-219ENST00000637329 DDX19AQ9NUU7 478 aaKnown RBP17.53■□□□□ 0.4
CLN6-219ENST00000637329 AFG3L2Q9Y4W6 797 aa17.53■□□□□ 0.4
CLN6-219ENST00000637329 ZHX2Q9Y6X8 837 aa17.53■□□□□ 0.4
CLN6-219ENST00000637329 MYPNQ86TC9 1320 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 PASKQ96RG2 1323 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 FAM205CA6NFA0 338 aa17.52■□□□□ 0.4
CLN6-219ENST00000637329 CUTAO60888 179 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms