RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 ASGR1P07306 291 aa8.81□□□□□ -1
CIITA-214ENST00000636238 IFIT2P09913 472 aaKnown RBP8.81□□□□□ -1
CIITA-214ENST00000636238 PDE6AP16499 860 aa8.81□□□□□ -1
CIITA-214ENST00000636238 TAL1P17542 331 aaPredicted RBP8.81□□□□□ -1
CIITA-214ENST00000636238 IGFBP4P22692 258 aa8.81□□□□□ -1
CIITA-214ENST00000636238 PBX2P40425 430 aa8.81□□□□□ -1
CIITA-214ENST00000636238 ACVR2BQ13705 512 aa8.81□□□□□ -1
CIITA-214ENST00000636238 BMP2KLQ5H9B9 411 aa8.81□□□□□ -1
CIITA-214ENST00000636238 SLC9C2Q5TAH2 1124 aa8.81□□□□□ -1
CIITA-214ENST00000636238 CLASRPQ8N2M8 674 aaKnown RBP8.81□□□□□ -1
CIITA-214ENST00000636238 CHST13Q8NET6 341 aa8.81□□□□□ -1
CIITA-214ENST00000636238 EAF2Q96CJ1 260 aaPredicted RBP8.81□□□□□ -1
CIITA-214ENST00000636238 DDX11Q96FC9 970 aa8.81□□□□□ -1
CIITA-214ENST00000636238 SLF1Q9BQI6 1058 aa8.81□□□□□ -1
CIITA-214ENST00000636238 Q9Y3F1 56 aa8.81□□□□□ -1
CIITA-214ENST00000636238 MYO5AQ9Y4I1 1855 aaKnown RBP8.81□□□□□ -1
CIITA-214ENST00000636238 GPR37L1O60883 481 aa8.8□□□□□ -1
CIITA-214ENST00000636238 C6orf222P0C671 652 aaPredicted RBP8.8□□□□□ -1
CIITA-214ENST00000636238 GNASQ5JWF2 1037 aa8.8□□□□□ -1
CIITA-214ENST00000636238 TMEM31Q5JXX7 168 aa8.8□□□□□ -1
CIITA-214ENST00000636238 KIAA1755Q5JYT7 1200 aa8.8□□□□□ -1
CIITA-214ENST00000636238 C12orf60Q5U649 245 aa8.8□□□□□ -1
CIITA-214ENST00000636238 PPP2R2DQ66LE6 453 aa8.8□□□□□ -1
CIITA-214ENST00000636238 C16orf86Q6ZW13 317 aa8.8□□□□□ -1
CIITA-214ENST00000636238 SPICE1Q8N0Z3 855 aa8.8□□□□□ -1
CIITA-214ENST00000636238 PRPF38AQ8NAV1 312 aaKnown RBP8.8□□□□□ -1
CIITA-214ENST00000636238 PHOSPHO2Q8TCD6 241 aa8.8□□□□□ -1
CIITA-214ENST00000636238 PPM1EQ8WY54 764 aa8.8□□□□□ -1
CIITA-214ENST00000636238 HIPK3Q9H422 1215 aa8.8□□□□□ -1
CIITA-214ENST00000636238 OSBPL3Q9H4L5 887 aa8.8□□□□□ -1
CIITA-214ENST00000636238 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
CIITA-214ENST00000636238 TLR7Q9NYK1 1049 aaKnown RBP8.8□□□□□ -1
CIITA-214ENST00000636238 ZHX1Q9UKY1 873 aaPredicted RBP8.8□□□□□ -1
CIITA-214ENST00000636238 SLC4A7Q9Y6M7 1214 aa8.8□□□□□ -1
CIITA-214ENST00000636238 LOC102724159A0A0B4J2E5 919 aa8.79□□□□□ -1
CIITA-214ENST00000636238 TCRBV5S4A2TA0A5A2 114 aa8.79□□□□□ -1
CIITA-214ENST00000636238 ZBED4O75132 1171 aa8.79□□□□□ -1
CIITA-214ENST00000636238 SUPT20HL2P0C7V6 817 aa8.79□□□□□ -1
CIITA-214ENST00000636238 EEF2P13639 858 aaKnown RBP8.79□□□□□ -1
CIITA-214ENST00000636238 AKR1B1P15121 316 aa8.79□□□□□ -1
CIITA-214ENST00000636238 SDSP20132 328 aa8.79□□□□□ -1
CIITA-214ENST00000636238 RFC2P35250 354 aa8.79□□□□□ -1
CIITA-214ENST00000636238 CDK8P49336 464 aa8.79□□□□□ -1
CIITA-214ENST00000636238 PWP2Q15269 919 aaKnown RBP8.79□□□□□ -1
CIITA-214ENST00000636238 SNRNP48Q6IEG0 339 aaKnown RBP8.79□□□□□ -1
CIITA-214ENST00000636238 PI4K2BQ8TCG2 481 aa8.79□□□□□ -1
CIITA-214ENST00000636238 VTI1AQ96AJ9 217 aa8.79□□□□□ -1
CIITA-214ENST00000636238 LRFN3Q9BTN0 628 aa8.79□□□□□ -1
CIITA-214ENST00000636238 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.79□□□□□ -1
CIITA-214ENST00000636238 KCNH6Q9H252 994 aa8.79□□□□□ -1
CIITA-214ENST00000636238 NKX2-4Q9H2Z4 354 aa8.79□□□□□ -1
CIITA-214ENST00000636238 LMCD1Q9NZU5 365 aa8.79□□□□□ -1
CIITA-214ENST00000636238 NYAP2Q9P242 653 aa8.79□□□□□ -1
CIITA-214ENST00000636238 MYH7P12883 1935 aa8.78□□□□□ -1
CIITA-214ENST00000636238 ASB14A6NK59 587 aa8.78□□□□□ -1
CIITA-214ENST00000636238 GRXCR1A8MXD5 290 aa8.78□□□□□ -1
CIITA-214ENST00000636238 TRIM6-TRIM34B2RNG4 842 aa8.78□□□□□ -1
CIITA-214ENST00000636238 ACTN1P12814 892 aa8.78□□□□□ -1
CIITA-214ENST00000636238 TKFCQ3LXA3 575 aa8.78□□□□□ -1
CIITA-214ENST00000636238 CCDC144BQ3MJ40 725 aa8.78□□□□□ -1
CIITA-214ENST00000636238 GIMAP6Q6P9H5 292 aa8.78□□□□□ -1
CIITA-214ENST00000636238 RILPL2Q969X0 211 aa8.78□□□□□ -1
CIITA-214ENST00000636238 SLC9A7Q96T83 725 aa8.78□□□□□ -1
CIITA-214ENST00000636238 NOC4LQ9BVI4 516 aaKnown RBP8.78□□□□□ -1
CIITA-214ENST00000636238 PPP1R12CQ9BZL4 782 aa8.78□□□□□ -1
CIITA-214ENST00000636238 ANTXR1Q9H6X2 564 aa8.78□□□□□ -1
CIITA-214ENST00000636238 ZNF287Q9HBT7 754 aa8.78□□□□□ -1
CIITA-214ENST00000636238 YBX2Q9Y2T7 364 aaKnown RBP8.78□□□□□ -1
CIITA-214ENST00000636238 CTDP1Q9Y5B0 961 aaPredicted RBP8.78□□□□□ -1
CIITA-214ENST00000636238 ZNF532Q9HCE3 1301 aa8.78□□□□□ -1
CIITA-214ENST00000636238 MYADML2A6NDP7 307 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 CTAGE5O15320 804 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 CDC45O75419 566 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 ACRP10323 421 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 ATP2A2P16615 1042 aaKnown RBP8.77□□□□□ -1.01
CIITA-214ENST00000636238 CYP2C18P33260 490 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 TNFAIP2Q03169 654 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 ITGA7Q13683 1181 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 UBE3CQ15386 1083 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 CCDC85BQ15834 202 aaPredicted RBP8.77□□□□□ -1.01
CIITA-214ENST00000636238 TMEM67Q5HYA8 995 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 PPP4R3BQ5MIZ7 849 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 FAM83BQ5T0W9 1011 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 ARMCX2Q7L311 632 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 ANKRD35Q8N283 1001 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 LCORLQ8N3X6 602 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 SDR42E1Q8WUS8 393 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 HLA-CQ95604 372 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 LENG1Q96BZ8 264 aaPredicted RBP8.77□□□□□ -1.01
CIITA-214ENST00000636238 GPATCH3Q96I76 525 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 KATNBL1Q9H079 304 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 AP5M1Q9H0R1 490 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 SLC38A10Q9HBR0 1119 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 ECHDC1Q9NTX5 307 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 FBXO28Q9NVF7 368 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 ARPP21Q9UBL0 812 aaPredicted RBP8.77□□□□□ -1.01
CIITA-214ENST00000636238 RAPGEFL1Q9UHV5 662 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 FEM1BQ9UK73 627 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 MTCH2Q9Y6C9 303 aa8.77□□□□□ -1.01
CIITA-214ENST00000636238 TTC41PQ6P2S7 1318 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms