RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 BECN2A8MW95 431 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 C19orf81C9J6K1 198 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 CCDC73Q6ZRK6 1079 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 NYAP1Q6ZVC0 841 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.43
CLN8-209ENST00000635970 SPICE1Q8N0Z3 855 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 LRRC47Q8N1G4 583 aaKnown RBP17.71■□□□□ 0.43
CLN8-209ENST00000635970 PROCA1Q8NCQ7 364 aaPredicted RBP17.71■□□□□ 0.43
CLN8-209ENST00000635970 TMOD4Q9NZQ9 345 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 STX8Q9UNK0 236 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
CLN8-209ENST00000635970 PDHXO00330 501 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 PFKFB2O60825 505 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 USP17L2Q6R6M4 530 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 CYB5R4Q7L1T6 521 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 ANKRD23Q86SG2 305 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 ZNF397Q8NF99 534 aaPredicted RBP17.7■□□□□ 0.42
CLN8-209ENST00000635970 BEGAINQ9BUH8 593 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 R3HDMLQ9H3Y0 253 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 CNNM2Q9H8M5 875 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 NYAP2Q9P242 653 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 AGTPBP1Q9UPW5 1226 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 RAD21O60216 631 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 TTLL1O95922 423 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 VCAM1P19320 739 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 ERO1AQ96HE7 468 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 KRT23Q9C075 422 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 ZSWIM5Q9P217 1185 aa17.7■□□□□ 0.42
CLN8-209ENST00000635970 MYH15Q9Y2K3 1946 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 KINO60870 393 aaKnown RBP17.69■□□□□ 0.42
CLN8-209ENST00000635970 TBC1D8O95759 1140 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 CYP2C8P10632 490 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 USP14P54578 494 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 STK3Q13188 491 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 CCDC144BQ3MJ40 725 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 Q6ZUG5 572 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 CHST3Q7LGC8 479 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 CREBRFQ8IUR6 639 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 CCDC144CPQ8IYA2 1237 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 C12orf42Q96LP6 360 aa17.69■□□□□ 0.42
CLN8-209ENST00000635970 FOXN1O15353 648 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 SKILP12757 684 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 ADD1P35611 737 aaKnown RBP17.68■□□□□ 0.42
CLN8-209ENST00000635970 KCNJ6P48051 423 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 FAM160A1Q05DH4 1040 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 TRDNQ13061 729 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 CRHR2Q13324 411 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 TAF1CQ15572 869 aaPredicted RBP17.68■□□□□ 0.42
CLN8-209ENST00000635970 OTUD7BQ6GQQ9 843 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 RASGRP2Q7LDG7 609 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 RALYLQ86SE5 291 aaKnown RBP17.68■□□□□ 0.42
CLN8-209ENST00000635970 CCAR1Q8IX12 1150 aaKnown RBP17.68■□□□□ 0.42
CLN8-209ENST00000635970 CEP57L1Q8IYX8 460 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 NCOA7Q8NI08 942 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 KIF18AQ8NI77 898 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 SH2D4AQ9H788 454 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 VCPKMTQ9H867 229 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 RLFQ13129 1914 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 JAK2O60674 1132 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 RCSD1Q6JBY9 416 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 TCEANC2Q96MN5 208 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 TCP11L1Q9NUJ3 509 aa17.68■□□□□ 0.42
CLN8-209ENST00000635970 TNKSO95271 1327 aa17.67■□□□□ 0.42
CLN8-209ENST00000635970 ALDH1A1P00352 501 aa17.67■□□□□ 0.42
CLN8-209ENST00000635970 DHX32Q7L7V1 743 aaKnown RBP17.67■□□□□ 0.42
CLN8-209ENST00000635970 MB21D2Q8IYB1 491 aaPredicted RBP17.67■□□□□ 0.42
CLN8-209ENST00000635970 BPIFA3Q9BQP9 254 aa17.67■□□□□ 0.42
CLN8-209ENST00000635970 AGXT2Q9BYV1 514 aa17.67■□□□□ 0.42
CLN8-209ENST00000635970 RPAP3Q9H6T3 665 aaPredicted RBP17.67■□□□□ 0.42
CLN8-209ENST00000635970 SAGE1Q9NXZ1 904 aa17.67■□□□□ 0.42
CLN8-209ENST00000635970 ZSWIM8A7E2V4 1837 aa17.67■□□□□ 0.42
CLN8-209ENST00000635970 NOVP48745 357 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 ANTXR2P58335 489 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 SNW1Q13573 536 aaKnown RBP17.66■□□□□ 0.42
CLN8-209ENST00000635970 IQCA1Q86XH1 822 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 ENGASEQ8NFI3 743 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 MKL1Q969V6 931 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 ZSCAN10Q96SZ4 725 aaPredicted RBP17.66■□□□□ 0.42
CLN8-209ENST00000635970 NUP88Q99567 741 aaPredicted RBP17.66■□□□□ 0.42
CLN8-209ENST00000635970 MTMR7Q9Y216 660 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 F5H6K3 240 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 CA12O43570 354 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 NRDCO43847 1150 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 KLRC3Q07444 240 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 SCRN1Q12765 414 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 KRT222Q8N1A0 295 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 ENAHQ8N8S7 591 aaPredicted RBP17.66■□□□□ 0.42
CLN8-209ENST00000635970 TMEM47Q9BQJ4 181 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 GOPCQ9HD26 462 aa17.66■□□□□ 0.42
CLN8-209ENST00000635970 COL11A1P12107 1806 aaPredicted RBP17.65■□□□□ 0.42
CLN8-209ENST00000635970 CCDC69A6NI79 296 aa17.65■□□□□ 0.42
CLN8-209ENST00000635970 NDUFB10O96000 172 aa17.65■□□□□ 0.42
CLN8-209ENST00000635970 C11orf57Q6ZUT1 292 aaPredicted RBP17.65■□□□□ 0.42
CLN8-209ENST00000635970 DHX40Q8IX18 779 aaKnown RBP17.65■□□□□ 0.42
CLN8-209ENST00000635970 CCAR2Q8N163 923 aaKnown RBP17.65■□□□□ 0.42
CLN8-209ENST00000635970 RGS22Q8NE09 1264 aa17.65■□□□□ 0.42
CLN8-209ENST00000635970 NSUN7Q8NE18 718 aaKnown RBP17.65■□□□□ 0.42
CLN8-209ENST00000635970 UBAC1Q9BSL1 405 aa17.65■□□□□ 0.42
CLN8-209ENST00000635970 ASCC2Q9H1I8 757 aaPredicted RBP17.65■□□□□ 0.42
CLN8-209ENST00000635970 ZCCHC17Q9NP64 241 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms