RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 UTRNP46939 3433 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 CCDC194A0A1B0GVG4 234 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 CUTAO60888 179 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 TAL1P17542 331 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 NDUFA8P51970 172 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 IKQ13123 557 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 ZNF174Q15697 407 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 DCAF15Q66K64 600 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 PPP1R18Q6NYC8 613 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 BTNL9Q6UXG8 535 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 FMR1NBQ8N0W7 255 aaPredicted RBP11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 ZNF341Q9BYN7 854 aa11.43□□□□□ -0.58
CACNA1A-216ENST00000635742 PHIPQ8WWQ0 1821 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 PITPNM2Q9BZ72 1349 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 OTOFQ9HC10 1997 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 CTNND1O60716 968 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 PFKFB1P16118 471 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 PTPREP23469 700 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 CMA1P23946 247 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 GNA11P29992 359 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 TRAPPC10P48553 1259 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 ADCY7P51828 1080 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 GPR162Q16538 588 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 INF2Q27J81 1249 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 DLK2Q6UY11 383 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 KRI1Q8N9T8 703 aaKnown RBP11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 FUCA2Q9BTY2 467 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 TNMDQ9H2S6 317 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 SH2D4AQ9H788 454 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 GRPEL1Q9HAV7 217 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 TMEM260Q9NX78 707 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 CEP131Q9UPN4 1083 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 PPP2R3BQ9Y5P8 575 aa11.42□□□□□ -0.58
CACNA1A-216ENST00000635742 LETM1O95202 739 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 DGKZQ13574 1117 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 JAKMIP3Q5VZ66 844 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 RESP18Q5W5W9 173 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 KRT25Q7Z3Z0 450 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 REXO1Q8N1G1 1221 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 L3MBTL3Q96JM7 780 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 WRNIP1Q96S55 665 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 FEZ1Q99689 392 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 RBSNQ9H1K0 784 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 BIN2Q9UBW5 565 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 ZNF112Q9UJU3 913 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 PRR12Q9ULL5 1215 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 HPSEQ9Y251 543 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 MORC2Q9Y6X9 1032 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 ADM5C9JUS6 153 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 MCM7P33993 719 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 STAT2P52630 851 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 ATP2C1P98194 919 aaPredicted RBP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 NONOQ15233 471 aaKnown RBP eCLIP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 MAP3K11Q16584 847 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 UBE2SQ16763 222 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 SPECC1Q5M775 1068 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 RBM43Q6ZSC3 357 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 CKAP2LQ8IYA6 745 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 SCYL3Q8IZE3 742 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 TSPY26PQ9H489 355 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 GINM1Q9NU53 330 aa11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 SRPRBQ9Y5M8 271 aaKnown RBP11.41□□□□□ -0.58
CACNA1A-216ENST00000635742 FAM237AA0A1B0GTK4 181 aa11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 KINO60870 393 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 BMP15O95972 392 aa11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 L1TD1Q5T7N2 865 aaKnown RBP11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 ZKSCAN4Q969J2 545 aaPredicted RBP11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 HOOK2Q96ED9 719 aa11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 RIC8AQ9NPQ8 531 aa11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 FBXO28Q9NVF7 368 aa11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 PCDHA1Q9Y5I3 950 aa11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 PARP14Q460N5 1801 aa11.4□□□□□ -0.58
CACNA1A-216ENST00000635742 WDR90Q96KV7 1748 aa11.4□□□□□ -0.59
CACNA1A-216ENST00000635742 SMCHD1A6NHR9 2005 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 XRCC6P12956 609 aaKnown RBP eCLIP11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 CLK2P49760 499 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 MRE11P49959 708 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 PTGDRQ13258 359 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 C4orf32Q8N8J7 132 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 CUL5Q93034 780 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 CSRNP2Q9H175 543 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 SCN4AP35499 1836 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 ZNF202O95125 648 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 MTMR2Q13614 643 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 PRKG1Q13976 671 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 USH1GQ495M9 461 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 DPY19L2Q6NUT2 758 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 USP49Q70CQ1 688 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 FBXO11Q86XK2 927 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 ZNF579Q8NAF0 562 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 TBCKQ8TEA7 893 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 KLRG1Q96E93 195 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 AMNQ9BXJ7 453 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 KIAA1683Q9H0B3 1180 aa11.39□□□□□ -0.59
CACNA1A-216ENST00000635742 EDIL3O43854 480 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 PTPRAP18433 802 aa11.38□□□□□ -0.59
CACNA1A-216ENST00000635742 EPHX2P34913 555 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms