RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 WWC2Q6AWC2 1192 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 DTHD1Q6ZMT9 781 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 SMIM5Q71RC9 77 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 SEPT12Q8IYM1 358 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 CCDC24Q8N4L8 307 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 CNBD1Q8NA66 436 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 LRRN4CLQ8ND94 238 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 NELFBQ8WX92 580 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 STAMQ92783 540 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 KIFC2Q96AC6 838 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 DYNLL2Q96FJ2 89 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 CARD6Q9BX69 1037 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 BLZF1Q9H2G9 400 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 CUEDC2Q9H467 287 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 MAGEF1Q9HAY2 307 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 DISC1Q9NRI5 854 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 BARHL2Q9NY43 387 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 FAM53CQ9NYF3 392 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 JAG2Q9Y219 1238 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 FAM205AQ6ZU69 1335 aa9.1□□□□□ -0.95
GPC3-204ENST00000631057 PALM3A6NDB9 673 aaPredicted RBP9.09□□□□□ -0.95
GPC3-204ENST00000631057 SOWAHDA6NJG2 315 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 KCNJ18B7U540 433 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 H7C1D1 291 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 UBA7P41226 1012 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 COPB1P53618 953 aaKnown RBP9.09□□□□□ -0.95
GPC3-204ENST00000631057 MAP3K9P80192 1104 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 TUBB2AQ13885 445 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 KCNJ12Q14500 433 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 KCNB1Q14721 858 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 SLC4A8Q2Y0W8 1093 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 TCP11X2Q5H9J9 407 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 ILDR2Q71H61 639 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 KRT25Q7Z3Z0 450 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 HEATR3Q7Z4Q2 680 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 TMTC1Q8IUR5 882 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 STAG2Q8N3U4 1231 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 RASSF8Q8NHQ8 419 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 TGFBRAP1Q8WUH2 860 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 WDR24Q96S15 920 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 MTRQ99707 1265 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 DESI2Q9BSY9 194 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 TUBB2BQ9BVA1 445 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 SPZ1Q9BXG8 430 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 CCSER1Q9C0I3 900 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 PCDHA6Q9UN73 950 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 PCDHA8Q9Y5H6 950 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 MRFAP1Q9Y605 127 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 ADGRG1Q9Y653 693 aa9.09□□□□□ -0.95
GPC3-204ENST00000631057 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 ADAMTS3O15072 1205 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 FANCGO15287 622 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 KIF5CO60282 957 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 GYPCP04921 128 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 RASA1P20936 1047 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 SMARCA1P28370 1054 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 CASP14P31944 242 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 CCT6AP40227 531 aaKnown RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 CLCN6P51797 869 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 PPP2R3AQ06190 1150 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 PDAP1Q13442 181 aaKnown RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 KARSQ15046 597 aaKnown RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 DIXDC1Q155Q3 683 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 TRAPPC3LQ5T215 181 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 LHX8Q68G74 356 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 RAD9BQ6WBX8 426 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 RASGRP2Q7LDG7 609 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 PTF1AQ7RTS3 328 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 SLF2Q8IX21 1173 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 RASGRP4Q8TDF6 673 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 SNED1Q8TER0 1413 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 NOC3LQ8WTT2 800 aaKnown RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 CPLX3Q8WVH0 158 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 RPGRQ92834 1020 aaKnown RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 CCDC47Q96A33 483 aaKnown RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 AK8Q96MA6 479 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 TMEM47Q9BQJ4 181 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 RTFDC1Q9BY42 306 aaPredicted RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 MRPL44Q9H9J2 332 aaKnown RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 TTF2Q9UNY4 1162 aaKnown RBP9.08□□□□□ -0.96
GPC3-204ENST00000631057 MYH4Q9Y623 1939 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 LRRC37AA6NMS7 1700 aa9.08□□□□□ -0.96
GPC3-204ENST00000631057 PSMA7O14818 248 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 PARP1P09874 1014 aaKnown RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 EEF1GP26641 437 aaKnown RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 PRCPP42785 496 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 BTDP43251 543 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 MNX1P50219 401 aaPredicted RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 ORC2Q13416 577 aaPredicted RBP9.07□□□□□ -0.96
GPC3-204ENST00000631057 MTF1Q14872 753 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 NFIXQ14938 502 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 INF2Q27J81 1249 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 TYW1BQ6NUM6 668 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 TMCO3Q6UWJ1 677 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 CYP26C1Q6V0L0 522 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 C16orf86Q6ZW13 317 aa9.07□□□□□ -0.96
GPC3-204ENST00000631057 MAPKAPK5Q8IW41 473 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms