RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 USP17L24Q0WX57 530 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 RESTQ13127 1097 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 PPIL2Q13356 520 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 PKP1Q13835 747 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 VGLL4Q14135 290 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 ZYXQ15942 572 aaKnown RBP11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 SH3D19Q5HYK7 790 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 FAM83BQ5T0W9 1011 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 MYSM1Q5VVJ2 828 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 FERMT3Q86UX7 667 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 MCF2L2Q86YR7 1114 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 CLEC10AQ8IUN9 316 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 SIAH1Q8IUQ4 282 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 CDAN1Q8IWY9 1227 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 SPICE1Q8N0Z3 855 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 REXO1Q8N1G1 1221 aaKnown RBP11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 ACER1Q8TDN7 264 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 ZKSCAN4Q969J2 545 aaPredicted RBP11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 MTMR8Q96EF0 704 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 PIGSQ96S52 555 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 GLIS2Q9BZE0 524 aaPredicted RBP11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 GBA2Q9HCG7 927 aaPredicted RBP11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 POLR3EQ9NVU0 708 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 ZDHHC9Q9Y397 364 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 RABGAP1Q9Y3P9 1069 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 PCDHA1Q9Y5I3 950 aa11.62□□□□□ -0.55
FOXCUT-201ENST00000628509 ABCB11O95342 1321 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 TRIM75PA6NK02 468 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 POTECB2RU33 542 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 STXBP3O00186 592 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 CYTH3O43739 400 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 FLOT1O75955 427 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 COPB2P35606 906 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 OAZ1P54368 228 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 AP3B2Q13367 1082 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 SNAPC2Q13487 334 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 PRKG1Q13976 671 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 RRP1BQ14684 758 aaKnown RBP11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 COG2Q14746 738 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 STK38Q15208 465 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 NONOQ15233 471 aaKnown RBP eCLIP11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 PRAMEF18Q5VWM3 479 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 MB21D1Q8N884 522 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 TMEM87AQ8NBN3 555 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 PIBF1Q8WXW3 757 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 KIFC2Q96AC6 838 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 PRR12Q9ULL5 1215 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 SCAF8Q9UPN6 1271 aaKnown RBP11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 AFG3L2Q9Y4W6 797 aa11.61□□□□□ -0.55
FOXCUT-201ENST00000628509 LAD1O00515 517 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 PPFIA3O75145 1194 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 VCAM1P19320 739 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 OSBPP22059 807 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 SLC16A2P36021 539 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 UBE2HP62256 183 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 QRICH1Q2TAL8 776 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 MAP1SQ66K74 1059 aaPredicted RBP11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 WWC2Q6AWC2 1192 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 RANBP17Q9H2T7 1088 aaKnown RBP11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 RPAP3Q9H6T3 665 aaPredicted RBP11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 PSTPIP2Q9H939 334 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 ZNF408Q9H9D4 720 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 RIC8AQ9NPQ8 531 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 RTEL1Q9NZ71 1219 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 KCNJ14Q9UNX9 436 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 SNCAIPQ9Y6H5 919 aa11.6□□□□□ -0.55
FOXCUT-201ENST00000628509 SSC5DA1L4H1 1573 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 MYH15Q9Y2K3 1946 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 SPDYE3A6NKU9 549 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 BTBD18B2RXH4 712 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 FIBPO43427 364 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 ZBTB48P10074 688 aaPredicted RBP11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 CETPP11597 493 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 GTF2A2P52657 109 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 HMGCS2P54868 508 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 IRX3P78415 501 aaPredicted RBP11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 JAG1P78504 1218 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 DNM1Q05193 864 aaKnown RBP11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 LDLRAD1Q5T700 205 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 ANO1Q5XXA6 986 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 TTBK2Q6IQ55 1244 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 SMC1BQ8NDV3 1235 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 AIFM3Q96NN9 605 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 PYM1Q9BRP8 204 aaKnown RBP11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 ELP3Q9H9T3 547 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 PPP1R9AQ9ULJ8 1098 aa11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 DDX49Q9Y6V7 483 aaKnown RBP11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 MORC2Q9Y6X9 1032 aaPredicted RBP11.59□□□□□ -0.55
FOXCUT-201ENST00000628509 hCG_1642624A0A1W2PR95 340 aa11.58□□□□□ -0.56
FOXCUT-201ENST00000628509 PPP6R2O75170 966 aa11.58□□□□□ -0.56
FOXCUT-201ENST00000628509 PRPF40AO75400 957 aaKnown RBP11.58□□□□□ -0.56
FOXCUT-201ENST00000628509 CELF2O95319 508 aaKnown RBP11.58□□□□□ -0.56
FOXCUT-201ENST00000628509 ICAM1P05362 532 aa11.58□□□□□ -0.56
FOXCUT-201ENST00000628509 SLURP2P0DP57 97 aa11.58□□□□□ -0.56
FOXCUT-201ENST00000628509 GCFC2P16383 781 aaKnown RBP11.58□□□□□ -0.56
FOXCUT-201ENST00000628509 NASPP49321 788 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms