RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 PICK1Q9NRD5 415 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 SBF1O95248 1867 aa8.65□□□□□ -1.02
PTP4A1-206ENST00000627002 SMCO2A6NFE2 343 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 USP17L10C9JJH3 530 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 TMEM232C9JQI7 657 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 SPTLC2O15270 562 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 PPP6R2O75170 966 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 GADD45BO75293 160 aaPredicted RBP8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 VEGFAP15692 232 aaPredicted RBP8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 INPP5BP32019 993 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 NF2P35240 595 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 SLC16A2P36021 539 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 ME1P48163 572 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 STAT2P52630 851 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 USP14P54578 494 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 SLC39A14Q15043 492 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 NPY5RQ15761 445 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 NOL9Q5SY16 702 aaKnown RBP8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 ASTLQ6HA08 431 aaPredicted RBP8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 CAVIN1Q6NZI2 390 aaKnown RBP8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 KRT26Q7Z3Y9 468 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 KRT25Q7Z3Z0 450 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 TEX2Q8IWB9 1127 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 TNFRSF25Q93038 417 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 WDR18Q9BV38 432 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 KIAA1683Q9H0B3 1180 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 FEM1BQ9UK73 627 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 CLIC4Q9Y696 253 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 MORC2Q9Y6X9 1032 aaPredicted RBP8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 MYH8P13535 1937 aa8.64□□□□□ -1.03
PTP4A1-206ENST00000627002 CCDC194A0A1B0GVG4 234 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 A0A1W2PQ27 194 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 A0A1W2PQ64 194 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 A0A1W2PQD8 194 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 TRIM75PA6NK02 468 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 M0R2N6 131 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 WDR46O15213 610 aaKnown RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 ATMINO43313 823 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 PPP1R12BO60237 982 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 LETM1O95202 739 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 HSPA1AP0DMV8 641 aaKnown RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 HSPA1BP0DMV9 641 aaKnown RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 PTPRAP18433 802 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 ADCY7P51828 1080 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 CDC37Q16543 378 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 QRICH1Q2TAL8 776 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 FAM83BQ5T0W9 1011 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 PRAMEF18Q5VWM3 479 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 MCTP2Q6DN12 878 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 TYW1BQ6NUM6 668 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 SPICE1Q8N0Z3 855 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 NUP88Q99567 741 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 AMNQ9BXJ7 453 aa8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 FTOQ9C0B1 505 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 GZF1Q9H116 711 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 TAF1DQ9H5J8 278 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.63□□□□□ -1.03
PTP4A1-206ENST00000627002 SSC5DA1L4H1 1573 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 C19orf81C9J6K1 198 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 ADM5C9JUS6 153 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 IREB2P48200 963 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 TOB1P50616 345 aaPredicted RBP8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 MRPL12P52815 198 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 MAP3K9P80192 1104 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 GSE1Q14687 1217 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 PTPAQ15257 358 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 ZYXQ15942 572 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 CCDC183Q5T5S1 534 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 ADALQ6DHV7 355 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 PIK3AP1Q6ZUJ8 805 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 REXO1Q8N1G1 1221 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 ZNF280CQ8ND82 737 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 CUL5Q93034 780 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 COA7Q96BR5 231 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 PGBD1Q96JS3 809 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 RIC8AQ9NPQ8 531 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 DDX19AQ9NUU7 478 aaKnown RBP8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 PRR12Q9ULL5 1215 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 PCDHA7Q9UN72 937 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 PCDHA6Q9UN73 950 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 PCDHA8Q9Y5H6 950 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 PCDHA1Q9Y5I3 950 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 CSADQ9Y600 493 aa8.62□□□□□ -1.03
PTP4A1-206ENST00000627002 POTEB2H3BUK9 544 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 CUTAO60888 179 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 PPP1R11O60927 126 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 USP2O75604 605 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 FDX1P10109 184 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 BACE1P56817 501 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 ORC2Q13416 577 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 MTMR2Q13614 643 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 NONOQ15233 471 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 EAPPQ56P03 285 aaPredicted RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 EARS2Q5JPH6 523 aaKnown RBP8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 KIAA1755Q5JYT7 1200 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 TTC38Q5R3I4 469 aa8.61□□□□□ -1.03
PTP4A1-206ENST00000627002 CCDC73Q6ZRK6 1079 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms