RNA–Protein interactions for RNA: ENST00000626262.2

UBAP1-205, Transcript of ubiquitin associated protein 1, humanhuman

TSL 2

Gene UBAP1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-205ENST00000626262 USP17L10C9JJH3 530 aa23.23■■□□□ 1.31
UBAP1-205ENST00000626262 LAD1O00515 517 aa23.23■■□□□ 1.31
UBAP1-205ENST00000626262 WNT10BO00744 389 aa23.23■■□□□ 1.31
UBAP1-205ENST00000626262 RPS12P25398 132 aaKnown RBP23.23■■□□□ 1.31
UBAP1-205ENST00000626262 IL17AQ16552 155 aa23.23■■□□□ 1.31
UBAP1-205ENST00000626262 PDILTQ8N807 584 aa23.23■■□□□ 1.31
UBAP1-205ENST00000626262 CCDC34Q96HJ3 373 aa23.23■■□□□ 1.31
UBAP1-205ENST00000626262 GMCL1Q96IK5 515 aa23.23■■□□□ 1.31
UBAP1-205ENST00000626262 F5H6K3 240 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 RAD21O60216 631 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 TBC1D12O60347 775 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 PPP1R11O60927 126 aaPredicted RBP23.22■■□□□ 1.31
UBAP1-205ENST00000626262 LONP1P36776 959 aaKnown RBP23.22■■□□□ 1.31
UBAP1-205ENST00000626262 KLRC3Q07444 240 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 A0A087X0B3 334 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 PTMAP06454 111 aaKnown RBP23.22■■□□□ 1.31
UBAP1-205ENST00000626262 ZNF280AP59817 542 aaPredicted RBP23.22■■□□□ 1.31
UBAP1-205ENST00000626262 NEK8Q86SG6 692 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 ZSCAN30Q86W11 494 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 TMEM39BQ9GZU3 492 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 PCDHA5Q9Y5H7 936 aa23.22■■□□□ 1.31
UBAP1-205ENST00000626262 FOXN1O15353 648 aa23.21■■□□□ 1.31
UBAP1-205ENST00000626262 NDUFB10O96000 172 aa23.21■■□□□ 1.31
UBAP1-205ENST00000626262 ORC2Q13416 577 aaPredicted RBP23.21■■□□□ 1.31
UBAP1-205ENST00000626262 NBPF9Q3BBW0 867 aa23.21■■□□□ 1.31
UBAP1-205ENST00000626262 DHX58Q96C10 678 aa23.21■■□□□ 1.31
UBAP1-205ENST00000626262 PYM1Q9BRP8 204 aaKnown RBP23.21■■□□□ 1.31
UBAP1-205ENST00000626262 RIC8AQ9NPQ8 531 aa23.21■■□□□ 1.31
UBAP1-205ENST00000626262 RRAGDQ9NQL2 400 aaPredicted RBP23.21■■□□□ 1.31
UBAP1-205ENST00000626262 BIN2Q9UBW5 565 aaPredicted RBP23.21■■□□□ 1.31
UBAP1-205ENST00000626262 PRPHP41219 470 aa23.2■■□□□ 1.3
UBAP1-205ENST00000626262 NT5DC1Q5TFE4 455 aa23.2■■□□□ 1.3
UBAP1-205ENST00000626262 SARM1Q6SZW1 724 aa23.2■■□□□ 1.3
UBAP1-205ENST00000626262 AOPEPQ8N6M6 819 aa23.2■■□□□ 1.3
UBAP1-205ENST00000626262 PSDA5PKW4 1024 aaPredicted RBP23.19■■□□□ 1.3
UBAP1-205ENST00000626262 SLFN14P0C7P3 912 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 JAKMIP3Q5VZ66 844 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 DTHD1Q6ZMT9 781 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 TBCKQ8TEA7 893 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 UPF1Q92900 1129 aaKnown RBP eCLIP23.19■■□□□ 1.33e-12■■■■■ 40.5
UBAP1-205ENST00000626262 TMEM60Q9H2L4 133 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 ARHGEF10LQ9HCE6 1279 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 PGAP2Q9UHJ9 254 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 ZBTB21Q9ULJ3 1066 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 SHTN1A0MZ66 631 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 PRR29P0C7W0 189 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 TNNI2P48788 182 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 RASSF7Q02833 373 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 LETM2Q2VYF4 491 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 PLA2G4DQ86XP0 818 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 TMEM260Q9NX78 707 aa23.19■■□□□ 1.3
UBAP1-205ENST00000626262 A0A1W2PRG0 241 aa23.18■■□□□ 1.3
UBAP1-205ENST00000626262 CCNT1O60563 726 aaKnown RBP23.18■■□□□ 1.3
UBAP1-205ENST00000626262 SARSP49591 514 aaKnown RBP23.18■■□□□ 1.3
UBAP1-205ENST00000626262 CDC37Q16543 378 aaPredicted RBP23.18■■□□□ 1.3
UBAP1-205ENST00000626262 QRICH1Q2TAL8 776 aa23.18■■□□□ 1.3
UBAP1-205ENST00000626262 SH3RF1Q7Z6J0 888 aa23.18■■□□□ 1.3
UBAP1-205ENST00000626262 CDAN1Q8IWY9 1227 aa23.18■■□□□ 1.3
UBAP1-205ENST00000626262 CUL5Q93034 780 aa23.18■■□□□ 1.3
UBAP1-205ENST00000626262 SMARCE1Q969G3 411 aa23.18■■□□□ 1.3
UBAP1-205ENST00000626262 ATAD5Q96QE3 1844 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 BMP3P12645 472 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 TXLNAP40222 546 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 CLK2P49760 499 aaKnown RBP23.17■■□□□ 1.3
UBAP1-205ENST00000626262 ZNF75DP51815 510 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 ISM2Q6H9L7 571 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 TRIML1Q8N9V2 468 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 SPATA20Q8TB22 786 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 TRIM5Q9C035 493 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 FZD9O00144 591 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 NEMFO60524 1076 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 OR52Z1P0C646 297 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 MRPL12P52815 198 aaKnown RBP23.17■■□□□ 1.3
UBAP1-205ENST00000626262 MAP3K10Q02779 954 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 E2F4Q16254 413 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 IQUBQ8NA54 791 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 GLT8D2Q9H1C3 349 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 MAN1B1Q9UKM7 699 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 TMX2Q9Y320 296 aa23.17■■□□□ 1.3
UBAP1-205ENST00000626262 BTNL9Q6UXG8 535 aa23.16■■□□□ 1.3
UBAP1-205ENST00000626262 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.16■■□□□ 1.3
UBAP1-205ENST00000626262 GRAMD1CQ8IYS0 662 aa23.16■■□□□ 1.3
UBAP1-205ENST00000626262 DPF2Q92785 391 aa23.16■■□□□ 1.3
UBAP1-205ENST00000626262 PAGE5Q96GU1 130 aa23.16■■□□□ 1.3
UBAP1-205ENST00000626262 NUP88Q99567 741 aaPredicted RBP23.16■■□□□ 1.3
UBAP1-205ENST00000626262 ZKSCAN5Q9Y2L8 839 aa23.16■■□□□ 1.3
UBAP1-205ENST00000626262 SMTNL1A8MU46 457 aa23.15■■□□□ 1.3
UBAP1-205ENST00000626262 IKBKBO14920 756 aa23.15■■□□□ 1.3
UBAP1-205ENST00000626262 PRELPP51888 382 aa23.15■■□□□ 1.3
UBAP1-205ENST00000626262 TNFAIP1Q13829 316 aa23.15■■□□□ 1.3
UBAP1-205ENST00000626262 SYDE2Q5VT97 1194 aa23.15■■□□□ 1.3
UBAP1-205ENST00000626262 NLGN2Q8NFZ4 835 aa23.15■■□□□ 1.3
UBAP1-205ENST00000626262 RTN4Q9NQC3 1192 aaKnown RBP23.15■■□□□ 1.3
UBAP1-205ENST00000626262 SMC2O95347 1197 aa23.14■■□□□ 1.3
UBAP1-205ENST00000626262 MSNP26038 577 aaKnown RBP23.14■■□□□ 1.3
UBAP1-205ENST00000626262 CAP2P40123 477 aa23.14■■□□□ 1.3
UBAP1-205ENST00000626262 ECE1P42892 770 aa23.14■■□□□ 1.3
UBAP1-205ENST00000626262 GMPSP49915 693 aaPredicted RBP23.14■■□□□ 1.3
UBAP1-205ENST00000626262 MIGA2Q7L4E1 593 aa23.14■■□□□ 1.3
UBAP1-205ENST00000626262 PSTPIP2Q9H939 334 aa23.14■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms