RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 MCM9Q9NXL9 1143 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 TMOD4Q9NZQ9 345 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 SERPINB13Q9UIV8 391 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 CASP8AP2Q9UKL3 1982 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 TTC41PQ6P2S7 1318 aa7.69□□□□□ -1.18
TCF4-249ENST00000625716 DOCK2Q92608 1830 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 PCNTO95613 3336 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 TCRBV5S4A2TA0A5A2 114 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 ZBBXA8MT70 800 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 GLRX3O76003 335 aaKnown RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 MBD4O95243 580 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 GDF11O95390 407 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 GNRH1P01148 92 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 HOXD10P28358 340 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 GSK3AP49840 483 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 HDAC1Q13547 482 aaPredicted RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 CERKLQ49MI3 558 aaPredicted RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 OTOP1Q7RTM1 612 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 CCDC84Q86UT8 332 aaPredicted RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 METTL16Q86W50 562 aaKnown RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 LCORLQ8N3X6 602 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 SMCR8Q8TEV9 937 aaPredicted RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 COL25A1Q9BXS0 654 aaPredicted RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 EHD4Q9H223 541 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 POLMQ9NP87 494 aaPredicted RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 ATP8A2Q9NTI2 1148 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 CPA4Q9UI42 421 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 SLC45A1Q9Y2W3 748 aa7.68□□□□□ -1.18
TCF4-249ENST00000625716 SUPT16HQ9Y5B9 1047 aaKnown RBP7.68□□□□□ -1.18
TCF4-249ENST00000625716 C19orf81C9J6K1 198 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 MPHOSPH10O00566 681 aaKnown RBP7.67□□□□□ -1.18
TCF4-249ENST00000625716 RNF113AO15541 343 aaKnown RBP7.67□□□□□ -1.18
TCF4-249ENST00000625716 ZFYP08048 801 aaPredicted RBP7.67□□□□□ -1.18
TCF4-249ENST00000625716 CYP2C8P10632 490 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 MX1P20591 662 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 HMGCS2P54868 508 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 LACTBP83111 547 aaPredicted RBP7.67□□□□□ -1.18
TCF4-249ENST00000625716 RAB3GAP1Q15042 981 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 ABCB5Q2M3G0 1257 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 TSHZ3Q63HK5 1081 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 GPAT2Q6NUI2 795 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 NBPF11Q86T75 865 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 VWA5B2Q8N398 1253 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 KBTBD3Q8NAB2 608 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 SDR42E1Q8WUS8 393 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 WDR18Q9BV38 432 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 CYLDQ9NQC7 956 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.67□□□□□ -1.18
TCF4-249ENST00000625716 SWAP70Q9UH65 585 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 ZBTB21Q9ULJ3 1066 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 AGTPBP1Q9UPW5 1226 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 PTPN22Q9Y2R2 807 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 SLC4A4Q9Y6R1 1079 aa7.67□□□□□ -1.18
TCF4-249ENST00000625716 USP17L10C9JJH3 530 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 GH2P01242 217 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 APPP05067 770 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 PSMC4P43686 418 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 PLCD1P51178 756 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 USP14P54578 494 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 PRMT2P55345 433 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 BACE1P56817 501 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 IRX3P78415 501 aaPredicted RBP7.66□□□□□ -1.18
TCF4-249ENST00000625716 MOGSQ13724 837 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 RRP1BQ14684 758 aaKnown RBP7.66□□□□□ -1.18
TCF4-249ENST00000625716 TATDN1Q6P1N9 297 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 C17orf99Q6UX52 265 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 EXOC6Q8TAG9 804 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 FEZ1Q99689 392 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 FSD1Q9BTV5 496 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 DNAJC18Q9H819 358 aa7.66□□□□□ -1.18
TCF4-249ENST00000625716 DCP1AQ9NPI6 582 aaPredicted RBP7.66□□□□□ -1.18
TCF4-249ENST00000625716 USP17L12C9JPN9 530 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 USP17L21D6R901 530 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 PRKAB2O43741 272 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 LAMB1P07942 1786 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 GNAT2P19087 354 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 GCLCP48506 637 aaPredicted RBP7.65□□□□□ -1.18
TCF4-249ENST00000625716 FCGRTP55899 365 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 SOX10P56693 466 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 MLLT1Q03111 559 aaPredicted RBP7.65□□□□□ -1.18
TCF4-249ENST00000625716 SLFNL1Q499Z3 407 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 SLC9C1Q4G0N8 1177 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 TREML2Q5T2D2 321 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 B4GALNT3Q6L9W6 998 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 RAET1EQ8TD07 263 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 APPBP2Q92624 585 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 NACAP1Q9BZK3 213 aa7.65□□□□□ -1.18
TCF4-249ENST00000625716 PUS7LQ9H0K6 701 aaKnown RBP7.65□□□□□ -1.18
TCF4-249ENST00000625716 CUEDC1Q9NWM3 386 aaPredicted RBP7.65□□□□□ -1.18
TCF4-249ENST00000625716 ARPP21Q9UBL0 812 aaPredicted RBP7.65□□□□□ -1.18
TCF4-249ENST00000625716 DOCK1Q14185 1865 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 TNPO2O14787 897 aaKnown RBP7.64□□□□□ -1.19
TCF4-249ENST00000625716 CYP2D6P10635 497 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 BCRP11274 1271 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 SHMT1P34896 483 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 TDO2P48775 406 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 JAG1P78504 1218 aa7.64□□□□□ -1.19
TCF4-249ENST00000625716 ZYXQ15942 572 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms