RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 CMTR1Q8N1G2 835 aaKnown RBP23■■□□□ 1.27
PDLIM2-221ENST00000622702 HOXC10Q9NYD6 342 aa23■■□□□ 1.27
PDLIM2-221ENST00000622702 PARP14Q460N5 1801 aa23■■□□□ 1.27
PDLIM2-221ENST00000622702 DSG3P32926 999 aa22.99■■□□□ 1.27
PDLIM2-221ENST00000622702 NSUN7Q8NE18 718 aaKnown RBP22.99■■□□□ 1.27
PDLIM2-221ENST00000622702 MTMR8Q96EF0 704 aa22.99■■□□□ 1.27
PDLIM2-221ENST00000622702 ARHGAP39Q9C0H5 1083 aa22.99■■□□□ 1.27
PDLIM2-221ENST00000622702 JMJD4Q9H9V9 463 aa22.99■■□□□ 1.27
PDLIM2-221ENST00000622702 ADAMTS5Q9UNA0 930 aa22.99■■□□□ 1.27
PDLIM2-221ENST00000622702 ZSWIM8A7E2V4 1837 aa22.99■■□□□ 1.27
PDLIM2-221ENST00000622702 FDX1P10109 184 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 FAM110CQ1W6H9 321 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 LBX2Q6XYB7 198 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 CCDC82Q8N4S0 544 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 KIFC2Q96AC6 838 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 INTS4Q96HW7 963 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 RNF26Q9BY78 433 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 EFCC1Q9HA90 598 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 RBPJLQ9UBG7 517 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 TRIM17Q9Y577 477 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 SPDYE16A6NNV3 312 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 PEX10O60683 326 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 ARHGEF6Q15052 776 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 TNS4Q8IZW8 715 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 SMARCC2Q8TAQ2 1214 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 GTF3C2Q8WUA4 911 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 PAGR1Q9BTK6 254 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 RBM27Q9P2N5 1060 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 MORF4L1Q9UBU8 362 aa22.98■■□□□ 1.27
PDLIM2-221ENST00000622702 PRPF3O43395 683 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 FMNL1O95466 1100 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 CTGFP29279 349 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 PSMC4P43686 418 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 POTEEQ6S8J3 1075 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 SAMD1Q6SPF0 538 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 OTOP1Q7RTM1 612 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 TRIM22Q8IYM9 498 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 PHKBQ93100 1093 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 ATG4CQ96DT6 458 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 RANBP17Q9H2T7 1088 aaKnown RBP22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 VAT1LQ9HCJ6 419 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 TXNRD2Q9NNW7 524 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 STK36Q9NRP7 1315 aa22.97■■□□□ 1.27
PDLIM2-221ENST00000622702 PTPDC1A2A3K4 754 aa22.96■■□□□ 1.27
PDLIM2-221ENST00000622702 VWA5AO00534 786 aa22.96■■□□□ 1.27
PDLIM2-221ENST00000622702 SSRP1Q08945 709 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-221ENST00000622702 RRP36Q96EU6 259 aaKnown RBP22.96■■□□□ 1.27
PDLIM2-221ENST00000622702 SLC26A6Q9BXS9 759 aa22.96■■□□□ 1.27
PDLIM2-221ENST00000622702 MCOLN1Q9GZU1 580 aa22.96■■□□□ 1.27
PDLIM2-221ENST00000622702 SLC38A10Q9HBR0 1119 aa22.96■■□□□ 1.27
PDLIM2-221ENST00000622702 V9GY48 417 aaPredicted RBP22.96■■□□□ 1.27
PDLIM2-221ENST00000622702 MGAMO43451 1857 aa22.95■■□□□ 1.27
PDLIM2-221ENST00000622702 JAK2O60674 1132 aa22.95■■□□□ 1.26
PDLIM2-221ENST00000622702 HMGN5P82970 282 aaKnown RBP22.95■■□□□ 1.26
PDLIM2-221ENST00000622702 MB21D1Q8N884 522 aa22.95■■□□□ 1.26
PDLIM2-221ENST00000622702 GPRC5AQ8NFJ5 357 aa22.95■■□□□ 1.26
PDLIM2-221ENST00000622702 TRIM47Q96LD4 638 aa22.95■■□□□ 1.26
PDLIM2-221ENST00000622702 PIGSQ96S52 555 aa22.95■■□□□ 1.26
PDLIM2-221ENST00000622702 RABGAP1Q9Y3P9 1069 aa22.95■■□□□ 1.26
PDLIM2-221ENST00000622702 PNMA6FA0A0J9YX94 578 aa22.94■■□□□ 1.26
PDLIM2-221ENST00000622702 ZBTB5O15062 677 aa22.94■■□□□ 1.26
PDLIM2-221ENST00000622702 FCGRTP55899 365 aa22.94■■□□□ 1.26
PDLIM2-221ENST00000622702 ERVK-9P63128 1117 aa22.94■■□□□ 1.26
PDLIM2-221ENST00000622702 ERVK-24P63145 666 aa22.94■■□□□ 1.26
PDLIM2-221ENST00000622702 AKAP17AQ02040 695 aaKnown RBP22.94■■□□□ 1.26
PDLIM2-221ENST00000622702 CDC37Q16543 378 aaPredicted RBP22.94■■□□□ 1.26
PDLIM2-221ENST00000622702 ZBED4O75132 1171 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 PPFIA3O75145 1194 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 CNMDO75829 334 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 DEXIO95424 95 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 FDPSP14324 419 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 PKN2Q16513 984 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 QRICH1Q2TAL8 776 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 Q3C1V9 767 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 HOMER1Q86YM7 354 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 REPS2Q8NFH8 660 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 BTBD7Q9P203 1132 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 ORC3Q9UBD5 711 aaPredicted RBP22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 SEC63Q9UGP8 760 aaKnown RBP22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 A0A0G2JMZ2 1700 aa22.93■■□□□ 1.26
PDLIM2-221ENST00000622702 GNRH1P01148 92 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 PKN1Q16512 942 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 SMC3Q9UQE7 1217 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 ZNF536O15090 1300 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 hCG_1642624A0A1W2PR95 340 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 ATP2A1O14983 1001 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 DTNBO60941 627 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 OAZ1P54368 228 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 SNAP25P60880 206 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 PFKFB3Q16875 520 aaPredicted RBP22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 PIBF1Q8WXW3 757 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 DDX11Q96FC9 970 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 PNMA2Q9UL42 364 aa22.92■■□□□ 1.26
PDLIM2-221ENST00000622702 HTTP42858 3142 aa22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 TNPO2O14787 897 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 ICAM1P05362 532 aa22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 HSP90AA1P07900 732 aaKnown RBP22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 SCG2P13521 617 aa22.91■■□□□ 1.26
PDLIM2-221ENST00000622702 FBXO46Q6PJ61 603 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms