RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 BAZ2BQ9UIF8 2168 aaKnown RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 DMTNQ08495 405 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 MTF1Q14872 753 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 BRD3Q15059 726 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 DOK7Q18PE1 504 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 UTP14CQ5TAP6 766 aaKnown RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 TBCKQ8TEA7 893 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 PARD6BQ9BYG5 372 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 IRX2Q9BZI1 471 aaPredicted RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 EHMT1Q9H9B1 1298 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 ZBTB21Q9ULJ3 1066 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 ZYXQ15942 572 aaKnown RBP14.29□□□□□ -0.12
MSH6-215ENST00000622629 NBPF11Q86T75 865 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 ZNF34Q8IZ26 560 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 COA7Q96BR5 231 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 PIGSQ96S52 555 aa14.29□□□□□ -0.12
MSH6-215ENST00000622629 TRIM49BA6NDI0 452 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 C8orf74Q6P047 294 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 CLEC4GQ6UXB4 293 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 C10orf67Q8IYJ2 551 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 SELENOOQ9BVL4 669 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 DDX41Q9UJV9 622 aaKnown RBP14.28□□□□□ -0.12
MSH6-215ENST00000622629 DLG5Q8TDM6 1919 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 PP2D1A8MPX8 630 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 LRRC41Q15345 812 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 WHAMMP3Q1A5X7 153 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 CTNNBL1Q8WYA6 563 aaPredicted RBP14.28□□□□□ -0.12
MSH6-215ENST00000622629 AGXT2Q9BYV1 514 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 VIRMAQ69YN4 1812 aaKnown RBP14.28□□□□□ -0.12
MSH6-215ENST00000622629 CYP27A1Q02318 531 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 MSL1Q68DK7 614 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 CERS3Q8IU89 383 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 TUBE1Q9UJT0 475 aa14.28□□□□□ -0.12
MSH6-215ENST00000622629 PNPLA7Q6ZV29 1317 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 ZMYND10O75800 440 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 PLCG1P19174 1290 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 PTPROQ16827 1216 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 LONRF2Q1L5Z9 754 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 TBC1D9BQ66K14 1250 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 GALNT17Q6IS24 598 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 SND1Q7KZF4 910 aaKnown RBP eCLIP14.27□□□□□ -0.126e-6■□□□□ 9.2
MSH6-215ENST00000622629 SH3RF3Q8TEJ3 882 aaPredicted RBP14.27□□□□□ -0.12
MSH6-215ENST00000622629 IL17RAQ96F46 866 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 MFAP3LO75121 409 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 IVLP07476 585 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 RDXP35241 583 aaKnown RBP14.27□□□□□ -0.12
MSH6-215ENST00000622629 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.12
MSH6-215ENST00000622629 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 OGFOD1Q8N543 542 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 TBC1D5Q92609 795 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 NOX5Q96PH1 765 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 PSTPIP2Q9H939 334 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 RWDD2AQ9UIY3 292 aa14.27□□□□□ -0.12
MSH6-215ENST00000622629 DCCP43146 1447 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 XDHP47989 1333 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 OPA1O60313 960 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 PNMA6AP0CW24 399 aaPredicted RBP14.27□□□□□ -0.13
MSH6-215ENST00000622629 IBSPP21815 317 aaPredicted RBP14.27□□□□□ -0.13
MSH6-215ENST00000622629 KLHL30Q0D2K2 578 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 KIAA0825Q8IV33 1275 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 MYOCDQ8IZQ8 938 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 ATRIPQ8WXE1 791 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 PDE11AQ9HCR9 933 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 DISC1Q9NRI5 854 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 VGLL3A8MV65 326 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 SLC16A2P36021 539 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 SRBD1Q8N5C6 995 aaKnown RBP14.27□□□□□ -0.13
MSH6-215ENST00000622629 PANX2Q96RD6 677 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 WDR24Q96S15 920 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 LEMD3Q9Y2U8 911 aa14.27□□□□□ -0.13
MSH6-215ENST00000622629 OVOS2A0A0G2JMS6 1433 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 KRT13P13646 458 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 RPL13P26373 211 aaKnown RBP14.26□□□□□ -0.13
MSH6-215ENST00000622629 PFKFB3Q16875 520 aaPredicted RBP14.26□□□□□ -0.13
MSH6-215ENST00000622629 CFAP58Q5T655 872 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 HAUS3Q68CZ6 603 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 MAEAQ7L5Y9 396 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 DGKHQ86XP1 1220 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 RGS22Q8NE09 1264 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 P2RX5Q93086 422 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 BUB1O43683 1085 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 ATP2B4P23634 1241 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 KIAA0753Q2KHM9 967 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 TCP11X2Q5H9J9 407 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 FAM76AQ8TAV0 307 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 DYDC1Q8WWB3 177 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 THRAP3Q9Y2W1 955 aaKnown RBP14.26□□□□□ -0.13
MSH6-215ENST00000622629 COL15A1P39059 1388 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 ILDR1Q86SU0 546 aaPredicted RBP14.26□□□□□ -0.13
MSH6-215ENST00000622629 GPBP1Q86WP2 473 aa14.26□□□□□ -0.13
MSH6-215ENST00000622629 TMEM110-MUSTN1A8MSY1 372 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 EEF1GP26641 437 aaKnown RBP14.25□□□□□ -0.13
MSH6-215ENST00000622629 PRCPP42785 496 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 ZNF512BQ96KM6 892 aaPredicted RBP14.25□□□□□ -0.13
MSH6-215ENST00000622629 DNM3Q9UQ16 869 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 PARP3Q9Y6F1 533 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 CFBP00751 764 aa14.25□□□□□ -0.13
MSH6-215ENST00000622629 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
MSH6-215ENST00000622629 STAG2Q8N3U4 1231 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms