RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 EIF6P56537 245 aaKnown RBP8.41□□□□□ -1.06
VPS29-212ENST00000621131 DLG4P78352 724 aa8.41□□□□□ -1.06
VPS29-212ENST00000621131 ADGRF1Q5T601 910 aa8.41□□□□□ -1.06
VPS29-212ENST00000621131 GALNT18Q6P9A2 607 aa8.41□□□□□ -1.06
VPS29-212ENST00000621131 SLCO6A1Q86UG4 719 aa8.41□□□□□ -1.06
VPS29-212ENST00000621131 ZSCAN18Q8TBC5 510 aaPredicted RBP8.41□□□□□ -1.06
VPS29-212ENST00000621131 BRF1Q92994 677 aa8.41□□□□□ -1.06
VPS29-212ENST00000621131 GPR55Q9Y2T6 319 aaPredicted RBP8.41□□□□□ -1.06
VPS29-212ENST00000621131 A0A1W2PQ45 241 aaPredicted RBP8.4□□□□□ -1.06
VPS29-212ENST00000621131 A0A1W2PQY0 241 aa8.4□□□□□ -1.06
VPS29-212ENST00000621131 SEMA7AO75326 666 aa8.4□□□□□ -1.06
VPS29-212ENST00000621131 NOL9Q5SY16 702 aaKnown RBP8.4□□□□□ -1.06
VPS29-212ENST00000621131 LCNL1Q6ZST4 164 aa8.4□□□□□ -1.06
VPS29-212ENST00000621131 SIAH1Q8IUQ4 282 aa8.4□□□□□ -1.06
VPS29-212ENST00000621131 SRRTQ9BXP5 876 aaKnown RBP8.4□□□□□ -1.06
VPS29-212ENST00000621131 FAM86C1Q9NVL1 165 aa8.4□□□□□ -1.06
VPS29-212ENST00000621131 FHOD1Q9Y613 1164 aa8.4□□□□□ -1.06
VPS29-212ENST00000621131 A0A087WZG4 1122 aa8.39□□□□□ -1.07
VPS29-212ENST00000621131 H0Y8X5 98 aa8.39□□□□□ -1.07
VPS29-212ENST00000621131 TMEM132EQ6IEE7 984 aa8.39□□□□□ -1.07
VPS29-212ENST00000621131 SGPP1Q9BX95 441 aa8.39□□□□□ -1.07
VPS29-212ENST00000621131 ACSL6Q9UKU0 697 aa8.39□□□□□ -1.07
VPS29-212ENST00000621131 A0A1W2PQH9 124 aa8.38□□□□□ -1.07
VPS29-212ENST00000621131 HRKO00198 91 aa8.38□□□□□ -1.07
VPS29-212ENST00000621131 CBFA2T2O43439 604 aa8.38□□□□□ -1.07
VPS29-212ENST00000621131 GSTM1P09488 218 aa8.38□□□□□ -1.07
VPS29-212ENST00000621131 ERVFRD-1P60508 538 aa8.38□□□□□ -1.07
VPS29-212ENST00000621131 CWF19L1Q69YN2 538 aaKnown RBP8.38□□□□□ -1.07
VPS29-212ENST00000621131 AMIGO3Q86WK7 504 aa8.38□□□□□ -1.07
VPS29-212ENST00000621131 C19orf47Q8N9M1 422 aaKnown RBP8.38□□□□□ -1.07
VPS29-212ENST00000621131 OR6P1Q8NGX9 317 aa8.38□□□□□ -1.07
VPS29-212ENST00000621131 SLC12A7Q9Y666 1083 aa8.38□□□□□ -1.07
VPS29-212ENST00000621131 SDHBP21912 280 aa8.37□□□□□ -1.07
VPS29-212ENST00000621131 NOP2P46087 812 aaKnown RBP8.37□□□□□ -1.07
VPS29-212ENST00000621131 LINC00310P59036 64 aa8.37□□□□□ -1.07
VPS29-212ENST00000621131 YBX1P67809 324 aaKnown RBP8.37□□□□□ -1.07
VPS29-212ENST00000621131 FIBCD1Q8N539 461 aa8.37□□□□□ -1.07
VPS29-212ENST00000621131 SHDQ96IW2 340 aa8.37□□□□□ -1.07
VPS29-212ENST00000621131 FCRL3Q96P31 734 aaPredicted RBP8.37□□□□□ -1.07
VPS29-212ENST00000621131 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
VPS29-212ENST00000621131 KRTAP4-7Q9BYR0 210 aa8.37□□□□□ -1.07
VPS29-212ENST00000621131 TGIF2Q9GZN2 237 aa8.37□□□□□ -1.07
VPS29-212ENST00000621131 TAF6LQ9Y6J9 622 aa8.37□□□□□ -1.07
VPS29-212ENST00000621131 ZSCAN22P10073 491 aaPredicted RBP8.36□□□□□ -1.07
VPS29-212ENST00000621131 ITGA4P13612 1032 aa8.36□□□□□ -1.07
VPS29-212ENST00000621131 PRKCAP17252 672 aa8.36□□□□□ -1.07
VPS29-212ENST00000621131 NASPP49321 788 aaPredicted RBP8.36□□□□□ -1.07
VPS29-212ENST00000621131 SRSF3P84103 164 aaKnown RBP8.36□□□□□ -1.07
VPS29-212ENST00000621131 LAPTM5Q13571 262 aa8.36□□□□□ -1.07
VPS29-212ENST00000621131 TCEAL1Q15170 157 aa8.36□□□□□ -1.07
VPS29-212ENST00000621131 SEC16BQ96JE7 1060 aa8.36□□□□□ -1.07
VPS29-212ENST00000621131 ACBD3Q9H3P7 528 aa8.36□□□□□ -1.07
VPS29-212ENST00000621131 MBD1Q9UIS9 605 aaPredicted RBP8.36□□□□□ -1.07
VPS29-212ENST00000621131 PCDHB10Q9UN67 800 aa8.36□□□□□ -1.07
VPS29-212ENST00000621131 DIS3Q9Y2L1 958 aaKnown RBP8.36□□□□□ -1.07
VPS29-212ENST00000621131 FGF10O15520 208 aaPredicted RBP8.35□□□□□ -1.07
VPS29-212ENST00000621131 VIPR1P32241 457 aa8.35□□□□□ -1.07
VPS29-212ENST00000621131 GNPTABQ3T906 1256 aa8.35□□□□□ -1.07
VPS29-212ENST00000621131 LCE1DQ5T752 114 aa8.35□□□□□ -1.07
VPS29-212ENST00000621131 HLA-DQA1Q5Y7H0 255 aa8.35□□□□□ -1.07
VPS29-212ENST00000621131 HAUS7Q99871 368 aa8.35□□□□□ -1.07
VPS29-212ENST00000621131 NOL6Q9H6R4 1146 aaKnown RBP8.35□□□□□ -1.07
VPS29-212ENST00000621131 PHAXQ9H814 394 aaKnown RBP8.35□□□□□ -1.07
VPS29-212ENST00000621131 KLHL14Q9P2G3 628 aa8.35□□□□□ -1.07
VPS29-212ENST00000621131 SF3B6Q9Y3B4 125 aaKnown RBP8.35□□□□□ -1.07
VPS29-212ENST00000621131 CASP7P55210 303 aa8.34□□□□□ -1.07
VPS29-212ENST00000621131 CYP4F8P98187 520 aa8.34□□□□□ -1.07
VPS29-212ENST00000621131 CIAPIN1Q6FI81 312 aa8.34□□□□□ -1.07
VPS29-212ENST00000621131 NUP43Q8NFH3 380 aa8.34□□□□□ -1.07
VPS29-212ENST00000621131 KLHL6Q8WZ60 621 aa8.34□□□□□ -1.07
VPS29-212ENST00000621131 KLHL25Q9H0H3 589 aa8.34□□□□□ -1.07
VPS29-212ENST00000621131 IMPACTQ9P2X3 320 aa8.34□□□□□ -1.07
VPS29-212ENST00000621131 MPOP05164 745 aa8.33□□□□□ -1.08
VPS29-212ENST00000621131 ARL4AP40617 200 aa8.33□□□□□ -1.08
VPS29-212ENST00000621131 SLC7A5Q01650 507 aa8.33□□□□□ -1.08
VPS29-212ENST00000621131 MVKQ03426 396 aa8.33□□□□□ -1.08
VPS29-212ENST00000621131 LCE4AQ5TA78 99 aa8.33□□□□□ -1.08
VPS29-212ENST00000621131 CNTD2Q9H8S5 307 aa8.33□□□□□ -1.08
VPS29-212ENST00000621131 TNFRSF12AQ9NP84 129 aa8.33□□□□□ -1.08
VPS29-212ENST00000621131 WHRNQ9P202 907 aa8.33□□□□□ -1.08
VPS29-212ENST00000621131 ABLIM1O14639 778 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 NUAK1O60285 661 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 MSL3P1P0C860 447 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 IFNGR1P15260 489 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 POU4F1Q01851 419 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 CBX2Q14781 532 aaPredicted RBP8.32□□□□□ -1.08
VPS29-212ENST00000621131 HEATR6Q6AI08 1181 aaKnown RBP8.32□□□□□ -1.08
VPS29-212ENST00000621131 FAM169BQ8N8A8 192 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 NAT16Q8N8M0 369 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 CPLX3Q8WVH0 158 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 MCMBPQ9BTE3 642 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 IRF2BPLQ9H1B7 796 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 SIRT5Q9NXA8 310 aa8.32□□□□□ -1.08
VPS29-212ENST00000621131 EPHX1P07099 455 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 PPP2R5DQ14738 602 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 PPP2R5EQ16537 467 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 CYP2R1Q6VVX0 501 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 ZDHHC15Q96MV8 337 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 PTCHD1Q96NR3 888 aa8.31□□□□□ -1.08
VPS29-212ENST00000621131 SUSD2Q9UGT4 822 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms