RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 EHD4Q9H223 541 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 KAT14Q9H8E8 782 aa11.98□□□□□ -0.49
CDH1-214ENST00000621016 PPP1R12BO60237 982 aaPredicted RBP11.97□□□□□ -0.49
CDH1-214ENST00000621016 ZNF18P17022 549 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 HIBADHP31937 336 aaKnown RBP11.97□□□□□ -0.49
CDH1-214ENST00000621016 EIF6P56537 245 aaKnown RBP11.97□□□□□ -0.49
CDH1-214ENST00000621016 NEDD9Q14511 834 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 SPATA1Q5VX52 437 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 KANK3Q6NY19 840 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 HPS3Q969F9 1004 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 PARD6BQ9BYG5 372 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 CCDC194A0A1B0GVG4 234 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 TADA3O75528 432 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 NR1I3Q14994 352 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 LONRF2Q1L5Z9 754 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 TRIM74Q86UV6 250 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 TRIM73Q86UV7 250 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 MAPKAPK5Q8IW41 473 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 IQUBQ8NA54 791 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 NELFBQ8WX92 580 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 CAPZA3Q96KX2 299 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 PHF20Q9BVI0 1012 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 DCP1AQ9NPI6 582 aaPredicted RBP11.97□□□□□ -0.49
CDH1-214ENST00000621016 KIF1AQ12756 1690 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 ADAMTS7Q9UKP4 1686 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 STK36Q9NRP7 1315 aa11.97□□□□□ -0.49
CDH1-214ENST00000621016 FAM170AA1A519 330 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 KRT9P35527 623 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 RPS8P62241 208 aaKnown RBP11.96□□□□□ -0.49
CDH1-214ENST00000621016 KRT31Q15323 416 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 PARP10Q53GL7 1025 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 FKBP15Q5T1M5 1219 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 TEX11Q8IYF3 940 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 TGFBRAP1Q8WUH2 860 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 CRNKL1Q9BZJ0 848 aaKnown RBP11.96□□□□□ -0.49
CDH1-214ENST00000621016 POLD4Q9HCU8 107 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 ZNF652Q9Y2D9 606 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 RTL9Q8NET4 1388 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 LGR5O75473 907 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 SCG2P13521 617 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 POLD1P28340 1107 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 SARSP49591 514 aaKnown RBP11.96□□□□□ -0.49
CDH1-214ENST00000621016 CHP1Q99653 195 aa11.96□□□□□ -0.49
CDH1-214ENST00000621016 PAIP2Q9BPZ3 127 aaKnown RBP11.96□□□□□ -0.49
CDH1-214ENST00000621016 PNPLA7Q6ZV29 1317 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 TJP1Q07157 1748 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 UBA7P41226 1012 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 MRPS25P82663 173 aaKnown RBP11.96□□□□□ -0.5
CDH1-214ENST00000621016 IL17AQ16552 155 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 C11orf91Q3C1V1 193 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 TMTC3Q6ZXV5 915 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 SLC35F6Q8N357 371 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 ZNF483Q8TF39 744 aaPredicted RBP11.96□□□□□ -0.5
CDH1-214ENST00000621016 NLRP3Q96P20 1036 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 FUT8Q9BYC5 575 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 PHLPP2Q6ZVD8 1323 aa11.96□□□□□ -0.5
CDH1-214ENST00000621016 GNPATO15228 680 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 ZMYND10O75800 440 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 UPP2O95045 317 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 KIF4AO95239 1232 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 USP8P40818 1118 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 LETM2Q2VYF4 491 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 CCDC178Q5BJE1 867 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 TBC1D22AQ8WUA7 517 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 SETDB2Q96T68 719 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 ABCC6O95255 1503 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 XDHP47989 1333 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 EP400Q96L91 3159 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 F8W031 263 aaPredicted RBP11.95□□□□□ -0.5
CDH1-214ENST00000621016 PRPF3O43395 683 aaKnown RBP11.95□□□□□ -0.5
CDH1-214ENST00000621016 GYPCP04921 128 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 TSPY3P0CV98 308 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 TSPY8P0CW00 308 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 DNA2P51530 1060 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 PNMA1Q8ND90 353 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 NSUN4Q96CB9 384 aaKnown RBP11.95□□□□□ -0.5
CDH1-214ENST00000621016 CCDC97Q96F63 343 aaPredicted RBP11.95□□□□□ -0.5
CDH1-214ENST00000621016 MTRQ99707 1265 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 GOPCQ9HD26 462 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 SPATS2LQ9NUQ6 558 aaKnown RBP11.95□□□□□ -0.5
CDH1-214ENST00000621016 ADGRG1Q9Y653 693 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 UTRNP46939 3433 aa11.95□□□□□ -0.5
CDH1-214ENST00000621016 CAPN15O75808 1086 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 PRCPP42785 496 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 CHMP4BP1P59074 171 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 GRIK5Q16478 980 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 HSP90B2PQ58FF3 399 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 NCAPH2Q6IBW4 605 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 FMNL3Q8IVF7 1028 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 TRIM47Q96LD4 638 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 PSMB7Q99436 277 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 FAM204AQ9H8W3 233 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 HDAC6Q9UBN7 1215 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 FAM205AQ6ZU69 1335 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 GLI3P10071 1580 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 EFCAB8A8MWE9 144 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 SRGAP2O75044 1071 aa11.94□□□□□ -0.5
CDH1-214ENST00000621016 TBX2Q13207 712 aaPredicted RBP11.94□□□□□ -0.5
CDH1-214ENST00000621016 TYW1BQ6NUM6 668 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms