RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 TRAF5O00463 557 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 TEX33O43247 280 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 MCM3P25205 808 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 KCNJ6P48051 423 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 DNM2P50570 870 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 GRM4Q14833 912 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 KRT31Q15323 416 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 TXNRD3Q86VQ6 643 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 PANX2Q96RD6 677 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 UIMC1Q96RL1 719 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 PPP1R12BO60237 982 aaPredicted RBP10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 ERCC3P19447 782 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 PAFAH1B1P43034 410 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 DNA2P51530 1060 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 DRC1Q96MC2 740 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 CUEDC2Q9H467 287 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 TUBB2AQ13885 445 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 CRACR2AQ9BSW2 395 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 TUBB2BQ9BVA1 445 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 SERPINB13Q9UIV8 391 aa10.3□□□□□ -0.76
RBFOX1-223ENST00000620507 MYL1P05976 194 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 ALDH1B1P30837 517 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 PKN1Q16512 942 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 NEK11Q8NG66 645 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 NAP1L4Q99733 375 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 MAGEF1Q9HAY2 307 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 BARHL2Q9NY43 387 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 CTIFO43310 598 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 TACC1O75410 805 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 PLCG1P19174 1290 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 FAM193AP78312 1265 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 GPSM2P81274 684 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 TOGARAM2Q6ZUX3 1019 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 CCDC65Q8IXS2 484 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 GPR161Q8N6U8 529 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 COA7Q96BR5 231 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 CAPZA3Q96KX2 299 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 SLC39A2Q9NP94 309 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 MACROD2A1Z1Q3 448 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 EEF1GP26641 437 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 CKAP4Q07065 602 aaKnown RBP10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 KMT5BQ4FZB7 885 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 ASPRV1Q53RT3 343 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 TCP11X2Q5H9J9 407 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 LEKR1Q6ZMV7 388 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 CEP95Q96GE4 821 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 TUBGCP2Q9BSJ2 902 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 GLT8D2Q9H1C3 349 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 PSTPIP2Q9H939 334 aa10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 EPN1Q9Y6I3 576 aaPredicted RBP10.29□□□□□ -0.76
RBFOX1-223ENST00000620507 PP2D1A8MPX8 630 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 MFAP3LO75121 409 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 TBCAO75347 108 aaKnown RBP10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 PRCPP42785 496 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 DPYDQ12882 1025 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 FBXO38Q6PIJ6 1188 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 DHTKD1Q96HY7 919 aaPredicted RBP10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 TRPC5Q9UL62 973 aaPredicted RBP10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 PCDHA12Q9UN75 941 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 TRIM37O94972 964 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 TTLL1O95922 423 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 ADRA2BP18089 450 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 MATR3P43243 847 aaKnown RBP eCLIP10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 KIAA0825Q8IV33 1275 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 TAF4BQ92750 862 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 SPAG5Q96R06 1193 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 ARID5AQ03989 594 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 HERC4Q5GLZ8 1057 aaPredicted RBP10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 TMC4Q7Z404 712 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 CCDC84Q86UT8 332 aaPredicted RBP10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 ZNF710Q8N1W2 664 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 JAKMIP2Q96AA8 810 aa10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 FAM207AQ9NSI2 230 aaPredicted RBP10.28□□□□□ -0.76
RBFOX1-223ENST00000620507 A0A1B0GTH6 734 aa10.27□□□□□ -0.76
RBFOX1-223ENST00000620507 B4DLN1 442 aa10.27□□□□□ -0.76
RBFOX1-223ENST00000620507 EARS2Q5JPH6 523 aaKnown RBP10.27□□□□□ -0.76
RBFOX1-223ENST00000620507 VPS36Q86VN1 386 aa10.27□□□□□ -0.76
RBFOX1-223ENST00000620507 NEDD1Q8NHV4 660 aa10.27□□□□□ -0.76
RBFOX1-223ENST00000620507 NKX2-3Q8TAU0 364 aa10.27□□□□□ -0.76
RBFOX1-223ENST00000620507 N4BP2Q86UW6 1770 aaPredicted RBP10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 FAM237AA0A1B0GTK4 181 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 USP17L5A8MUK1 530 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 RAD51AP2Q09MP3 1159 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 TRAF1Q13077 416 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 PRR5LQ6MZQ0 368 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 NLGN1Q8N2Q7 840 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 P2RX5Q93086 422 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 ZBTB9Q96C00 473 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 TBC1D7Q9P0N9 293 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 TRIM49BA6NDI0 452 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 TUBBP07437 444 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 NR1I3Q14994 352 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 GPATCH4Q5T3I0 446 aaKnown RBP10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 OGFOD1Q8N543 542 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 ACRBPQ8NEB7 543 aa10.27□□□□□ -0.77
RBFOX1-223ENST00000620507 ANKRD7Q92527 254 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms