RNA–Protein interactions for RNA: ENST00000620309.4

PSMB3-212, Transcript of proteasome subunit beta 3, humanhuman

TSL 2

Gene PSMB3, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-212ENST00000620309 CLIP2Q9UDT6 1046 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 SLC12A7Q9Y666 1083 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 IVNS1ABPQ9Y6Y0 642 aa8.23□□□□□ -1.09
PSMB3-212ENST00000620309 GOLGA8AA7E2F4 631 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 NDUFB10O96000 172 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 CALM1P0DP23 149 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 CALM2P0DP24 149 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 CALM3P0DP25 149 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 FDX1P10109 184 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 CDC27P30260 824 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 MAPK4P31152 587 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 SLC1A4P43007 532 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 PSMC4P43686 418 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 GJA8P48165 433 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 METAP2P50579 478 aaKnown RBP eCLIP8.22□□□□□ -1.09
PSMB3-212ENST00000620309 STAT2P52630 851 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 MOGSQ13724 837 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 COG2Q14746 738 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 MTFR1Q15390 333 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 CCDC96Q2M329 555 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 WDR78Q5VTH9 848 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 C17orf99Q6UX52 265 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 NFXL1Q6ZNB6 911 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 CATSPERGQ6ZRH7 1159 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 TMTC3Q6ZXV5 915 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 CATIPQ7Z7H3 387 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 FAM160B2Q86V87 743 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 SPICE1Q8N0Z3 855 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 GPRC5AQ8NFJ5 357 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 RAET1EQ8TD07 263 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 DCAF4Q8WV16 495 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 SOCS4Q8WXH5 440 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 DPF3Q92784 378 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 ZSCAN31Q96LW9 406 aaPredicted RBP8.22□□□□□ -1.09
PSMB3-212ENST00000620309 NCOA5Q9HCD5 579 aaKnown RBP8.22□□□□□ -1.09
PSMB3-212ENST00000620309 EMILIN3Q9NT22 766 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 FAM217BQ9NTX9 383 aaPredicted RBP8.22□□□□□ -1.09
PSMB3-212ENST00000620309 MTMR10Q9NXD2 777 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 MAD2L2Q9UI95 211 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 RABGAP1Q9Y3P9 1069 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 MYH7BA7E2Y1 1941 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 ADGRA2Q96PE1 1338 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 STK36Q9NRP7 1315 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 FRMPD3Q5JV73 1810 aa8.22□□□□□ -1.09
PSMB3-212ENST00000620309 TCHHQ07283 1943 aa8.21□□□□□ -1.09
PSMB3-212ENST00000620309 PALM3A6NDB9 673 aaPredicted RBP8.21□□□□□ -1.1
PSMB3-212ENST00000620309 PLEKHA8P1O95397 391 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 CTDNEP1O95476 244 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 BCRP11274 1271 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 BMP3P12645 472 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 BMP8BP34820 402 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 ERVK-9P63128 1117 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 ERVK-24P63145 666 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 ZNF543Q08ER8 600 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 FUT2Q10981 343 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 PLS1Q14651 629 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 NTRK3Q16288 839 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 RTN1Q16799 776 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 SLC35G1Q2M3R5 365 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 ASPRV1Q53RT3 343 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 SLFN13Q68D06 897 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 SAMD1Q6SPF0 538 aaPredicted RBP8.21□□□□□ -1.1
PSMB3-212ENST00000620309 LBX2Q6XYB7 198 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 CCDC83Q8IWF9 413 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 CCDC144CPQ8IYA2 1237 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 NSUN7Q8NE18 718 aaKnown RBP8.21□□□□□ -1.1
PSMB3-212ENST00000620309 CTCFLQ8NI51 663 aaPredicted RBP8.21□□□□□ -1.1
PSMB3-212ENST00000620309 CHURC1Q8WUH1 139 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 GDF15Q99988 308 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 SLF1Q9BQI6 1058 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 HTATIP2Q9BUP3 242 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 ARHGAP39Q9C0H5 1083 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 PRDM6Q9NQX0 595 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 RBM28Q9NW13 759 aaKnown RBP8.21□□□□□ -1.1
PSMB3-212ENST00000620309 SLC5A4Q9NY91 659 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 MORF4L1Q9UBU8 362 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 FEM1BQ9UK73 627 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 PNMA2Q9UL42 364 aa8.21□□□□□ -1.1
PSMB3-212ENST00000620309 PTPDC1A2A3K4 754 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 F5H6K3 240 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 ZBED4O75132 1171 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 SLC25A27O95847 323 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 GJB1P08034 283 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 CTGFP29279 349 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 KIF5BP33176 963 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 UBXN2AP68543 259 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 KLRC3Q07444 240 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 STK3Q13188 491 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 BECN1Q14457 450 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 PPP2R5BQ15173 497 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 LRIT3Q3SXY7 679 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 FAM83BQ5T0W9 1011 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 GPATCH4Q5T3I0 446 aaKnown RBP8.2□□□□□ -1.1
PSMB3-212ENST00000620309 Q7L0L9 218 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.2□□□□□ -1.1
PSMB3-212ENST00000620309 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
PSMB3-212ENST00000620309 STAG2Q8N3U4 1231 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 DEFB123Q8N688 67 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 NECAB1Q8N987 351 aa8.2□□□□□ -1.1
PSMB3-212ENST00000620309 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms