RNA–Protein interactions for RNA: ENST00000619550.4

HNF4A-209, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 5 BASIC

Gene HNF4A, Length 4,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-209ENST00000619550 ANKRD65E5RJM6 399 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 ATP2A1O14983 1001 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 DRP2Q13474 957 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 IQCB1Q15051 598 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 VSIG1Q86XK7 387 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 DHX40Q8IX18 779 aaKnown RBP12.12□□□□□ -0.47
HNF4A-209ENST00000619550 GBP7Q8N8V2 638 aaPredicted RBP12.12□□□□□ -0.47
HNF4A-209ENST00000619550 SLC24A3Q9HC58 644 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 SPHKAPQ2M3C7 1700 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 SEMA3EO15041 775 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 PPIP5K2O43314 1243 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 PFDN1O60925 122 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 LAMC1P11047 1609 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 ASIC2Q16515 512 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 PTPN21Q16825 1174 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 MUM1Q2TAK8 710 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 E4F1Q66K89 784 aaPredicted RBP12.12□□□□□ -0.47
HNF4A-209ENST00000619550 TEKT1Q969V4 418 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 NCAPD2Q15021 1401 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 CREB3O43889 395 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 CIB2O75838 187 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 RPSAP08865 295 aaKnown RBP12.12□□□□□ -0.47
HNF4A-209ENST00000619550 CORO7P57737 925 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 ARMT1Q9H993 441 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 NOP53Q9NZM5 478 aaKnown RBP12.12□□□□□ -0.47
HNF4A-209ENST00000619550 MAN1B1Q9UKM7 699 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 MRFAP1Q9Y605 127 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 STK24Q9Y6E0 443 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 USH1CQ9Y6N9 552 aa12.12□□□□□ -0.47
HNF4A-209ENST00000619550 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 FMR1NBQ8N0W7 255 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 ACRBPQ8NEB7 543 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 ATG3Q9NT62 314 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 LEMD3Q9Y2U8 911 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 BTBD18B2RXH4 712 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 TRIM66O15016 1216 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 GTPBP6O43824 516 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 ZMYND10O75800 440 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 CIAO1O76071 339 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 TOB2Q14106 344 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 RRAGAQ7L523 313 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 STAG1Q8WVM7 1258 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.11□□□□□ -0.478e-7■■□□□ 11.4
HNF4A-209ENST00000619550 ASAP1Q9ULH1 1129 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 DKC1O60832 514 aaKnown RBP eCLIP12.11□□□□□ -0.471e-7■■■■■ 118
HNF4A-209ENST00000619550 SEPT2Q15019 361 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 CLUL1Q15846 466 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 SEL1L2Q5TEA6 688 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 SFMBT2Q5VUG0 894 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 PHLDB3Q6NSJ2 640 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 FNBP4Q8N3X1 1017 aaPredicted RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 HOMER2Q9NSB8 354 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 PNMA2Q9UL42 364 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 E2F5Q15329 346 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 TRIM31Q9BZY9 425 aa12.11□□□□□ -0.47
HNF4A-209ENST00000619550 IQCGQ9H095 443 aaKnown RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 RNF17Q9BXT8 1623 aaKnown RBP12.11□□□□□ -0.47
HNF4A-209ENST00000619550 NOL3O60936 208 aaKnown RBP12.1□□□□□ -0.47
HNF4A-209ENST00000619550 BBOX1O75936 387 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 ZAP70P43403 619 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 CC2D2BQ6DHV5 1058 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 HS2ST1Q7LGA3 356 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 SYCE1Q8N0S2 351 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 BICD1Q96G01 975 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 GOLPH3LQ9H4A5 285 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 FAM207AQ9NSI2 230 aaPredicted RBP12.1□□□□□ -0.47
HNF4A-209ENST00000619550 JAG2Q9Y219 1238 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 PCP11498 1178 aaKnown RBP12.1□□□□□ -0.47
HNF4A-209ENST00000619550 GUCY2DQ02846 1103 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 KLHL30Q0D2K2 578 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 PLS1Q14651 629 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 TOGARAM2Q6ZUX3 1019 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 EPC1Q9H2F5 836 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 SAMSN1Q9NSI8 373 aaKnown RBP12.1□□□□□ -0.47
HNF4A-209ENST00000619550 NEURL4Q96JN8 1562 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 CLTAP09496 248 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 DENND2CQ68D51 928 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 CFAP57Q96MR6 1250 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 ALDH8A1Q9H2A2 487 aaPredicted RBP12.1□□□□□ -0.47
HNF4A-209ENST00000619550 LRRIQ1Q96JM4 1722 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 ZNF532Q9HCE3 1301 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 RGS16O15492 202 aaPredicted RBP12.1□□□□□ -0.47
HNF4A-209ENST00000619550 PPARDQ03181 441 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 MFSD14BQ5SR56 506 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 USPL1Q5W0Q7 1092 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 NBPF10Q6P3W6 841 aaKnown RBP12.1□□□□□ -0.47
HNF4A-209ENST00000619550 CCDC65Q8IXS2 484 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 CCDC197Q8NCU1 140 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
HNF4A-209ENST00000619550 DNAJC8O75937 253 aaPredicted RBP12.09□□□□□ -0.47
HNF4A-209ENST00000619550 FGAP02671 866 aa12.09□□□□□ -0.47
HNF4A-209ENST00000619550 RPL13P26373 211 aaKnown RBP12.09□□□□□ -0.47
HNF4A-209ENST00000619550 NNTQ13423 1086 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms