RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 ZNF318Q5VUA4 2279 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 DNAJC13O75165 2243 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 ARHGEF35A5YM69 484 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 EEF1GP26641 437 aaKnown RBP3.36□□□□□ -1.87
LPP-221ENST00000618621 GYS2P54840 703 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 ADAM9Q13443 819 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 SEPT2Q15019 361 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 CFAP157Q5JU67 520 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 FAM210AQ96ND0 272 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 ASAP1Q9ULH1 1129 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 PRAMEF22A3QJZ6 481 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 CHMP2AO43633 222 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 SDCCAG8Q86SQ7 713 aaPredicted RBP3.36□□□□□ -1.87
LPP-221ENST00000618621 CCDC25Q86WR0 208 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 FMR1NBQ8N0W7 255 aaPredicted RBP3.36□□□□□ -1.87
LPP-221ENST00000618621 CCDC89Q8N998 374 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 FUCA2Q9BTY2 467 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 MIS12Q9H081 205 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 E7EVH7 732 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 SARNPP82979 210 aaKnown RBP3.36□□□□□ -1.87
LPP-221ENST00000618621 SNCBQ16143 134 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 OTUD6AQ7L8S5 288 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 AFAP1L2Q8N4X5 818 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 CCDC151A5D8V7 595 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PDE4DQ08499 809 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 ARMC9Q7Z3E5 817 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 TRMT44Q8IYL2 757 aaKnown RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 PIK3R5Q8WYR1 880 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 VEZTQ9HBM0 779 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 FAM207AQ9NSI2 230 aaPredicted RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 ADGRL2O95490 1459 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 LARGE1O95461 756 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 CTDSPL2Q05D32 466 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PTGDRQ13258 359 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 TRPC3Q13507 836 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 RPAINQ86UA6 219 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 RNF168Q8IYW5 571 aaPredicted RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 CCDC197Q8NCU1 140 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 TBC1D22AQ8WUA7 517 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 GGA1Q9UJY5 639 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 AGTPBP1Q9UPW5 1226 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PCDHB13Q9Y5F0 798 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 DAPK3O43293 454 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 DKC1O60832 514 aaKnown RBP eCLIP3.35□□□□□ -1.871e-5■■■■□ 25.7
LPP-221ENST00000618621 H2AFXP16104 143 aaPredicted RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 TSNAXIP1Q2TAA8 658 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 BBOF1Q8ND07 529 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.35□□□□□ -1.87
LPP-221ENST00000618621 ATP2A3Q93084 1043 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 SSX2IPQ9Y2D8 614 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 TMEM94Q12767 1356 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 I3L4J1 428 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PHKG2P15735 406 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 ATP2B4P23634 1241 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 ADCY8P40145 1251 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 TXKP42681 527 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PRR36Q9H6K5 1346 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 ABCC10Q5T3U5 1492 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 MBD5Q9P267 1494 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 LIG3P49916 1009 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 SATB1Q01826 763 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 KCNA1Q09470 495 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PROSER3Q2NL68 480 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 CSRNP1Q96S65 589 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 IMPG2Q9BZV3 1241 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 NEUROD4Q9HD90 331 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 ZMYM6O95789 1325 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 SUN1O94901 812 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 FMNL1O95466 1100 aaPredicted RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 APLP1P51693 650 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 GUCY2FP51841 1108 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 MAP7D1Q3KQU3 841 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 CCDC63Q8NA47 563 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PI4K2BQ8TCG2 481 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 CALR3Q96L12 384 aaKnown RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 GPCPD1Q9NPB8 672 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 TESPA1A2RU30 521 aaPredicted RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 ZAP70P43403 619 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 COPB1P53618 953 aaKnown RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 IL9RQ01113 521 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 CC2D1AQ6P1N0 951 aaPredicted RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 INTS8Q75QN2 995 aaKnown RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 CDAN1Q8IWY9 1227 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 PALM2Q8IXS6 379 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 COL4A3BPQ9Y5P4 624 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 ADORA1P30542 326 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 FKBP3Q00688 224 aaKnown RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 RNASELQ05823 741 aaKnown RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 LONRF3Q496Y0 759 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 MMS22LQ6ZRQ5 1243 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 MCF2L2Q86YR7 1114 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 KDM4CQ9H3R0 1056 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 ATP6V0A2Q9Y487 856 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 DCUN1D2Q6PH85 259 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 CABP7Q86V35 215 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 CHURC1Q8WUH1 139 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 DIS3Q9Y2L1 958 aaKnown RBP3.35□□□□□ -1.87
LPP-221ENST00000618621 SSH2Q76I76 1423 aa3.35□□□□□ -1.87
LPP-221ENST00000618621 KCNJ6P48051 423 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms