RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 CHMP4BP1P59074 171 aa5.48□□□□□ -1.53
TARDBP-220ENST00000618606 RAD51AP2Q09MP3 1159 aa5.48□□□□□ -1.53
TARDBP-220ENST00000618606 TMC3Q7Z5M5 1100 aa5.48□□□□□ -1.53
TARDBP-220ENST00000618606 SLCO6A1Q86UG4 719 aa5.48□□□□□ -1.53
TARDBP-220ENST00000618606 CNNM2Q9H8M5 875 aa5.48□□□□□ -1.53
TARDBP-220ENST00000618606 ACSL6Q9UKU0 697 aa5.48□□□□□ -1.53
TARDBP-220ENST00000618606 SUPT16HQ9Y5B9 1047 aaKnown RBP5.48□□□□□ -1.53
TARDBP-220ENST00000618606 PCDHB14Q9Y5E9 798 aa5.48□□□□□ -1.53
TARDBP-220ENST00000618606 NUDT19A8MXV4 375 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 FKTNO75072 461 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 PFKLP17858 780 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 CCNFP41002 786 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 ADAM17P78536 824 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 CYP4F8P98187 520 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 SNW1Q13573 536 aaKnown RBP5.47□□□□□ -1.53
TARDBP-220ENST00000618606 VWA3BQ502W6 1294 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 RPTNQ6XPR3 784 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 ATG4CQ96DT6 458 aa5.47□□□□□ -1.53
TARDBP-220ENST00000618606 GPR55Q9Y2T6 319 aaPredicted RBP5.47□□□□□ -1.53
TARDBP-220ENST00000618606 A0A1W2PQ45 241 aaPredicted RBP5.46□□□□□ -1.54
TARDBP-220ENST00000618606 A0A1W2PQY0 241 aa5.46□□□□□ -1.54
TARDBP-220ENST00000618606 PRKCAP17252 672 aa5.46□□□□□ -1.54
TARDBP-220ENST00000618606 ENDOUP21128 410 aaKnown RBP5.46□□□□□ -1.54
TARDBP-220ENST00000618606 CRKP46108 304 aa5.46□□□□□ -1.54
TARDBP-220ENST00000618606 LIMS1P48059 325 aa5.46□□□□□ -1.54
TARDBP-220ENST00000618606 LIPIQ6XZB0 460 aa5.46□□□□□ -1.54
TARDBP-220ENST00000618606 FERMT3Q86UX7 667 aa5.46□□□□□ -1.54
TARDBP-220ENST00000618606 REXO1Q8N1G1 1221 aaKnown RBP5.46□□□□□ -1.54
TARDBP-220ENST00000618606 ZNF296Q8WUU4 475 aaPredicted RBP5.46□□□□□ -1.54
TARDBP-220ENST00000618606 USP40Q9NVE5 1235 aa5.46□□□□□ -1.54
TARDBP-220ENST00000618606 MATN3O15232 486 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 SIGLEC6O43699 453 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 PRAMEF1O95521 474 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 MSL3P1P0C860 447 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 PDIA4P13667 645 aaKnown RBP5.45□□□□□ -1.54
TARDBP-220ENST00000618606 MAPKAPK2P49137 400 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 NR1I3Q14994 352 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 TARBP2Q15633 366 aaKnown RBP5.45□□□□□ -1.54
TARDBP-220ENST00000618606 PLEKHN1Q494U1 663 aaPredicted RBP5.45□□□□□ -1.54
TARDBP-220ENST00000618606 NT5DC1Q5TFE4 455 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 OVOS1Q6IE37 1185 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 FNIP1Q8TF40 1166 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 PRDM14Q9GZV8 571 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 ERVK13-1Q9NX77 482 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 SRRDQ9UH36 339 aa5.45□□□□□ -1.54
TARDBP-220ENST00000618606 SH3D21A4FU49 640 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 C1QTNF3-AMACRE9PGA6 284 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 CLEC3AO75596 197 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 POLR2BP30876 1174 aaKnown RBP5.44□□□□□ -1.54
TARDBP-220ENST00000618606 CEBPAP49715 358 aaPredicted RBP5.44□□□□□ -1.54
TARDBP-220ENST00000618606 ZNF200P98182 395 aaPredicted RBP5.44□□□□□ -1.54
TARDBP-220ENST00000618606 CLCQ05315 142 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 ZC3H14Q6PJT7 736 aaKnown RBP5.44□□□□□ -1.54
TARDBP-220ENST00000618606 NLRC3Q7RTR2 1065 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 NUP43Q8NFH3 380 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 EAF1Q96JC9 268 aaPredicted RBP5.44□□□□□ -1.54
TARDBP-220ENST00000618606 SPATA25Q9BR10 227 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 SUSD2Q9UGT4 822 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 ADAMTS1Q9UHI8 967 aa5.44□□□□□ -1.54
TARDBP-220ENST00000618606 ITGB3P05106 788 aa5.43□□□□□ -1.54
TARDBP-220ENST00000618606 NME1P15531 152 aaKnown RBP5.43□□□□□ -1.54
TARDBP-220ENST00000618606 FBLN1P23142 703 aa5.43□□□□□ -1.54
TARDBP-220ENST00000618606 KRTAP1-1Q07627 177 aa5.43□□□□□ -1.54
TARDBP-220ENST00000618606 SAPCD2Q86UD0 394 aa5.43□□□□□ -1.54
TARDBP-220ENST00000618606 LSRQ86X29 649 aaPredicted RBP5.43□□□□□ -1.54
TARDBP-220ENST00000618606 TMEM192Q8IY95 271 aa5.43□□□□□ -1.54
TARDBP-220ENST00000618606 SLC16A11Q8NCK7 471 aa5.43□□□□□ -1.54
TARDBP-220ENST00000618606 SMPD4Q9NXE4 827 aa5.43□□□□□ -1.54
TARDBP-220ENST00000618606 MINPP1Q9UNW1 487 aa5.43□□□□□ -1.54
TARDBP-220ENST00000618606 A0A1B0GTL3 188 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 MEIS3P2A8K0S8 358 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 TNFRSF10CO14798 259 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
TARDBP-220ENST00000618606 HTRA3P83110 453 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 FOXO4P98177 505 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 MRPL58Q14197 206 aaKnown RBP5.42□□□□□ -1.54
TARDBP-220ENST00000618606 LRRFIP1Q32MZ4 808 aaKnown RBP5.42□□□□□ -1.54
TARDBP-220ENST00000618606 SEZ6Q53EL9 994 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 SLITRK4Q8IW52 837 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 ADGRG2Q8IZP9 1017 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 ZNF512BQ96KM6 892 aaPredicted RBP5.42□□□□□ -1.54
TARDBP-220ENST00000618606 SORCS2Q96PQ0 1159 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 RBM15Q96T37 977 aaKnown RBP eCLIP5.42□□□□□ -1.54
TARDBP-220ENST00000618606 NT5C1AQ9BXI3 368 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 C1QTNF3Q9BXJ4 246 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 CHST7Q9NS84 486 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 UBP1Q9NZI7 540 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 DUSP10Q9Y6W6 482 aa5.42□□□□□ -1.54
TARDBP-220ENST00000618606 OVOL3O00110 214 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 NOBOXO60393 691 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 ZNF205O95201 554 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 BMP8BP34820 402 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 CTSKP43235 329 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 ZNF165P49910 485 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 CCDC27Q2M243 656 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 CPZQ66K79 652 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 INTS3Q68E01 1043 aaKnown RBP5.41□□□□□ -1.54
TARDBP-220ENST00000618606 GK5Q6ZS86 529 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 HS2ST1Q7LGA3 356 aa5.41□□□□□ -1.54
TARDBP-220ENST00000618606 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms