RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 LRMPQ12912 555 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 HOMER3Q9NSC5 361 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 SLC12A6Q9UHW9 1150 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 KDRP35968 1356 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 ZNF233A6NK53 670 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 KRIT1O00522 736 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 NCAPG2Q86XI2 1143 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 RETREG2Q8NC44 543 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 KIF9Q9HAQ2 790 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 LMNB2Q03252 620 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 DISC1Q9NRI5 854 aa12.23□□□□□ -0.45
CCDC144B-208ENST00000618081 HGSO14964 777 aaPredicted RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 AOC3Q16853 763 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ERVV-2B6SEH9 535 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ATP6V1E1P36543 226 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 DACT3Q96B18 629 aaPredicted RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 KLHL14Q9P2G3 628 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ARMCX3Q9UH62 379 aaPredicted RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ATP8B3O60423 1300 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 MED23Q9ULK4 1368 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ATP10BO94823 1461 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 SHANK2Q9UPX8 1470 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 PPFIA4O75335 1185 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 GTF2IP78347 998 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 FAM71BQ8TC56 605 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 IFT122Q9HBG6 1241 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 DLATP10515 647 aaKnown RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 PPP2R5AQ15172 486 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 DPP9Q86TI2 863 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ANKRD36BP1Q96IX9 119 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 LRRIQ4A6NIV6 560 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 KCNJ18B7U540 433 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ALAS1P13196 640 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ABCB4P21439 1286 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 KCNJ12Q14500 433 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 MUM1Q2TAK8 710 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 CCDC93Q567U6 631 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 TTLL7Q6ZT98 887 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 BBOF1Q8ND07 529 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 U2AF1L4Q8WU68 220 aaKnown RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 HDAC11Q96DB2 347 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 JPH2Q9BR39 696 aaPredicted RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ARHGAP42A6NI28 874 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 CTNNA1P35221 906 aaKnown RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 ZNF75DP51815 510 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 FAM81BQ96LP2 452 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 UIMC1Q96RL1 719 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 SOS2Q07890 1332 aaPredicted RBP12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 METTL23Q86XA0 190 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 DBNDD2Q9BQY9 259 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 COL4A3BPQ9Y5P4 624 aa12.22□□□□□ -0.45
CCDC144B-208ENST00000618081 SESTD1Q86VW0 696 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 FAM227BQ96M60 508 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 NRBP2Q9NSY0 501 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 IRAK4Q9NWZ3 460 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 BLIDQ8IZY5 108 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 TSPYL6Q8N831 410 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 CPSF3Q9UKF6 684 aaKnown RBP12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 HSPA8P11142 646 aaKnown RBP12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 ATP2B4P23634 1241 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 TECP42680 631 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 MORC3Q14149 939 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 METTL14Q9HCE5 456 aaKnown RBP12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 SLC8A2Q9UPR5 921 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 MTX1Q13505 466 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 NOP9Q86U38 636 aaKnown RBP12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 MAP7D3Q8IWC1 876 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 PDZD8Q8NEN9 1154 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 PARD3BQ8TEW8 1205 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 AP5M1Q9H0R1 490 aa12.21□□□□□ -0.45
CCDC144B-208ENST00000618081 BPIFB4P59827 614 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 TSTA3Q13630 321 aaPredicted RBP12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 PDE1CQ14123 709 aaPredicted RBP12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 PHLDB3Q6NSJ2 640 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 RAPH1Q70E73 1250 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 ZNF654Q8IZM8 581 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 GCNAQ96QF7 691 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 CDR2Q01850 454 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 RNASELQ05823 741 aaKnown RBP12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 CHMP6Q96FZ7 201 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 AKT3Q9Y243 479 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 BCS1LQ9Y276 419 aa12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 BZW2Q9Y6E2 419 aaKnown RBP12.21□□□□□ -0.46
CCDC144B-208ENST00000618081 ADAMTS12P58397 1594 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 KCNK3O14649 394 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 RPS8P62241 208 aaKnown RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 TMCO4Q5TGY1 634 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 LRGUKQ96M69 825 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 LRFN2Q9ULH4 789 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 E7EWF7 191 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 SETSIPP0DME0 302 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 OSBPP22059 807 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 CACTINQ8WUQ7 758 aaKnown RBP12.2□□□□□ -0.46
CCDC144B-208ENST00000618081 MAGEF1Q9HAY2 307 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms