RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 SH3RF3Q8TEJ3 882 aaPredicted RBP12.17□□□□□ -0.46
POLR2A-209ENST00000617998 FAM167AQ96KS9 214 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 NCAPD2Q15021 1401 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 CCP110O43303 1012 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 ADCY3O60266 1144 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 CDK8P49336 464 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 PCDHB7Q9Y5E2 793 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 KCNV1Q6PIU1 500 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 CALUO43852 315 aaPredicted RBP12.17□□□□□ -0.46
POLR2A-209ENST00000617998 ARHGAP4P98171 946 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 CDCA5Q96FF9 252 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 CCDC94Q9BW85 323 aaPredicted RBP12.17□□□□□ -0.46
POLR2A-209ENST00000617998 HAUS6Q7Z4H7 955 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 DHX58Q96C10 678 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 CEP170P1Q96L14 293 aa12.17□□□□□ -0.46
POLR2A-209ENST00000617998 NUP88Q99567 741 aaPredicted RBP12.17□□□□□ -0.46
POLR2A-209ENST00000617998 GTPBP4Q9BZE4 634 aaKnown RBP12.17□□□□□ -0.46
POLR2A-209ENST00000617998 PDHXO00330 501 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 SH3BP5O60239 455 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 MRPL44Q9H9J2 332 aaKnown RBP12.16□□□□□ -0.46
POLR2A-209ENST00000617998 CAMTA2O94983 1202 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 GCNT3O95395 438 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 PPP1R12CQ9BZL4 782 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 TMCO5BA8MYB1 307 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 DEFB128Q7Z7B8 93 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 VWA3AA6NCI4 1184 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 EXOC3O60645 756 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 SRGAP2CP0DJJ0 459 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 TNNC1P63316 161 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
POLR2A-209ENST00000617998 PRPF4BQ13523 1007 aaKnown RBP12.16□□□□□ -0.46
POLR2A-209ENST00000617998 CREB3L3Q68CJ9 461 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 NOP9Q86U38 636 aaKnown RBP12.16□□□□□ -0.46
POLR2A-209ENST00000617998 DYNLL2Q96FJ2 89 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 MAP3K20Q9NYL2 800 aaKnown RBP12.16□□□□□ -0.46
POLR2A-209ENST00000617998 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 CCDC184Q52MB2 194 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 C4orf50Q6ZRC1 276 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 NECAB1Q8N987 351 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 MYL10Q9BUA6 226 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 CD163L1Q9NR16 1453 aa12.16□□□□□ -0.46
POLR2A-209ENST00000617998 TET3O43151 1660 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 NDC80O14777 642 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 ATP5JP18859 108 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 SNAP25P60880 206 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
POLR2A-209ENST00000617998 IER5Q5VY09 327 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 TCP11Q8WWU5 503 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 KRT10P13645 584 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 RAD51AP2Q09MP3 1159 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 BEND3Q5T5X7 828 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 ZNF449Q6P9G9 518 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 TMEM199Q8N511 208 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 ZNF18P17022 549 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 DCAF4Q8WV16 495 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 VPS33BQ9H267 617 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 ST7Q9NRC1 585 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 TNFAIP2Q03169 654 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 CDC37Q16543 378 aaPredicted RBP12.15□□□□□ -0.46
POLR2A-209ENST00000617998 SDE2Q6IQ49 451 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 CACTINQ8WUQ7 758 aaKnown RBP12.15□□□□□ -0.46
POLR2A-209ENST00000617998 SOCS4Q8WXH5 440 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 TEX13BQ9BXU2 312 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 UBE2OQ9C0C9 1292 aaKnown RBP12.15□□□□□ -0.46
POLR2A-209ENST00000617998 MOSPD1Q9UJG1 213 aa12.15□□□□□ -0.46
POLR2A-209ENST00000617998 DNA2P51530 1060 aa12.15□□□□□ -0.47
POLR2A-209ENST00000617998 UBE3CQ15386 1083 aa12.15□□□□□ -0.47
POLR2A-209ENST00000617998 SCYL3Q8IZE3 742 aa12.15□□□□□ -0.47
POLR2A-209ENST00000617998 PARD3BQ8TEW8 1205 aa12.15□□□□□ -0.47
POLR2A-209ENST00000617998 SECISBP2LQ93073 1101 aaKnown RBP12.15□□□□□ -0.47
POLR2A-209ENST00000617998 GCOM2Q9BZD3 368 aaPredicted RBP12.15□□□□□ -0.47
POLR2A-209ENST00000617998 MROH7-TTC4A0A0A0MT08 1334 aa12.15□□□□□ -0.47
POLR2A-209ENST00000617998 GH1P01241 217 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 ZKSCAN4Q969J2 545 aaPredicted RBP12.14□□□□□ -0.47
POLR2A-209ENST00000617998 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 ENTPD3O75355 529 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 SFPQP23246 707 aaKnown RBP eCLIP12.14□□□□□ -0.47
POLR2A-209ENST00000617998 PRDX5P30044 214 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 IPO4Q8TEX9 1081 aaKnown RBP12.14□□□□□ -0.47
POLR2A-209ENST00000617998 DDX25Q9UHL0 483 aaKnown RBP12.14□□□□□ -0.47
POLR2A-209ENST00000617998 TTLL3Q9Y4R7 772 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 MST1RQ04912 1400 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 SYKP43405 635 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 FSTL1Q12841 308 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 HERC4Q5GLZ8 1057 aaPredicted RBP12.14□□□□□ -0.47
POLR2A-209ENST00000617998 NBPF10Q6P3W6 841 aaKnown RBP12.14□□□□□ -0.47
POLR2A-209ENST00000617998 GOLGA6CA6NDK9 693 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 GOLGA6BA6NDN3 693 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 MAP3K13O43283 966 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 USO1O60763 962 aaKnown RBP12.14□□□□□ -0.47
POLR2A-209ENST00000617998 GOLGA6DP0CG33 693 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 NNMTP40261 264 aa12.14□□□□□ -0.47
POLR2A-209ENST00000617998 ZNF654Q8IZM8 581 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms