RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 USH1GQ495M9 461 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 CHURC1Q8WUH1 139 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 PPP1R9BQ96SB3 815 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 PDIA4P13667 645 aaKnown RBP18.7■□□□□ 0.58
SNAP47-213ENST00000617596 CCDC173Q0VFZ6 552 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 GNL2Q13823 731 aaKnown RBP18.7■□□□□ 0.58
SNAP47-213ENST00000617596 NOM1Q5C9Z4 860 aaKnown RBP18.7■□□□□ 0.58
SNAP47-213ENST00000617596 GADL1Q6ZQY3 521 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 RBM46Q8TBY0 533 aaKnown RBP18.7■□□□□ 0.58
SNAP47-213ENST00000617596 WNK4Q96J92 1243 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 C12orf42Q96LP6 360 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 GDPD2Q9HCC8 539 aa18.7■□□□□ 0.58
SNAP47-213ENST00000617596 FKBP1BP68106 108 aa18.69■□□□□ 0.58
SNAP47-213ENST00000617596 PPIL2Q13356 520 aa18.69■□□□□ 0.58
SNAP47-213ENST00000617596 SH3D19Q5HYK7 790 aa18.69■□□□□ 0.58
SNAP47-213ENST00000617596 RASGRP4Q8TDF6 673 aa18.69■□□□□ 0.58
SNAP47-213ENST00000617596 SLF1Q9BQI6 1058 aa18.69■□□□□ 0.58
SNAP47-213ENST00000617596 SAFBQ15424 915 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNAP47-213ENST00000617596 HS1BP3Q53T59 392 aa18.68■□□□□ 0.58
SNAP47-213ENST00000617596 EARS2Q5JPH6 523 aaKnown RBP18.68■□□□□ 0.58
SNAP47-213ENST00000617596 FAM160B2Q86V87 743 aa18.68■□□□□ 0.58
SNAP47-213ENST00000617596 GBP4Q96PP9 640 aa18.68■□□□□ 0.58
SNAP47-213ENST00000617596 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
SNAP47-213ENST00000617596 TFIP11Q9UBB9 837 aaKnown RBP18.68■□□□□ 0.58
SNAP47-213ENST00000617596 CNPY2Q9Y2B0 182 aa18.68■□□□□ 0.58
SNAP47-213ENST00000617596 PCDHA1Q9Y5I3 950 aa18.68■□□□□ 0.58
SNAP47-213ENST00000617596 A0A0G2JLL6 359 aaPredicted RBP18.68■□□□□ 0.58
SNAP47-213ENST00000617596 FAM205CA6NFA0 338 aa18.68■□□□□ 0.58
SNAP47-213ENST00000617596 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
SNAP47-213ENST00000617596 HUNKP57058 714 aa18.68■□□□□ 0.58
SNAP47-213ENST00000617596 PRRT2Q7Z6L0 340 aaPredicted RBP18.68■□□□□ 0.58
SNAP47-213ENST00000617596 ZSCAN16Q9H4T2 348 aaPredicted RBP18.68■□□□□ 0.58
SNAP47-213ENST00000617596 SH3GLB2Q9NR46 395 aa18.68■□□□□ 0.58
SNAP47-213ENST00000617596 SMCO2A6NFE2 343 aa18.67■□□□□ 0.58
SNAP47-213ENST00000617596 PLA2G6O60733 806 aa18.67■□□□□ 0.58
SNAP47-213ENST00000617596 KRT2P35908 639 aa18.67■□□□□ 0.58
SNAP47-213ENST00000617596 CEBPZQ03701 1054 aaKnown RBP18.67■□□□□ 0.58
SNAP47-213ENST00000617596 PRPF38AQ8NAV1 312 aaKnown RBP18.67■□□□□ 0.58
SNAP47-213ENST00000617596 ATG4CQ96DT6 458 aa18.67■□□□□ 0.58
SNAP47-213ENST00000617596 RANBP17Q9H2T7 1088 aaKnown RBP18.67■□□□□ 0.58
SNAP47-213ENST00000617596 PPP1R9AQ9ULJ8 1098 aa18.67■□□□□ 0.58
SNAP47-213ENST00000617596 KCNH4Q9UQ05 1017 aa18.67■□□□□ 0.58
SNAP47-213ENST00000617596 PASKQ96RG2 1323 aa18.67■□□□□ 0.58
SNAP47-213ENST00000617596 CXCL11O14625 94 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 YY1P25490 414 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 U2AF2P26368 475 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNAP47-213ENST00000617596 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.66■□□□□ 0.58
SNAP47-213ENST00000617596 CATSPERGQ6ZRH7 1159 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 FBXO11Q86XK2 927 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 CPXCR1Q8N123 301 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 AMNQ9BXJ7 453 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 OFD1O75665 1012 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 MOGSQ13724 837 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 MTERF4Q7Z6M4 381 aaKnown RBP18.66■□□□□ 0.58
SNAP47-213ENST00000617596 NOSTRINQ8IVI9 506 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 SMC1BQ8NDV3 1235 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 CCDC148Q8NFR7 591 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 AGBL1Q96MI9 1066 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 ZMYND12Q9H0C1 365 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 PCDHA4Q9UN74 947 aa18.66■□□□□ 0.58
SNAP47-213ENST00000617596 PEX10O60683 326 aa18.65■□□□□ 0.58
SNAP47-213ENST00000617596 BLIDQ8IZY5 108 aa18.65■□□□□ 0.58
SNAP47-213ENST00000617596 FOXP1Q9H334 677 aaPredicted RBP18.65■□□□□ 0.58
SNAP47-213ENST00000617596 RAVER2Q9HCJ3 691 aaKnown RBP18.65■□□□□ 0.58
SNAP47-213ENST00000617596 ATP6V1DQ9Y5K8 247 aa18.65■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L15C9J2P7 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L13C9JLJ4 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L11C9JVI0 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L18D6R9N7 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L22D6RA61 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L17D6RBQ6 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L19D6RCP7 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L20D6RJB6 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 FIBPO43427 364 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 USP17L24Q0WX57 530 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 TPRNQ4KMQ1 711 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 MYSM1Q5VVJ2 828 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 CLEC17AQ6ZS10 378 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 ZSCAN30Q86W11 494 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 ZNF784Q8NCA9 323 aaPredicted RBP18.64■□□□□ 0.58
SNAP47-213ENST00000617596 CCDC12Q8WUD4 166 aaPredicted RBP18.64■□□□□ 0.58
SNAP47-213ENST00000617596 BRMS1Q9HCU9 246 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 TMEM260Q9NX78 707 aa18.64■□□□□ 0.58
SNAP47-213ENST00000617596 ZNF536O15090 1300 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 VWA5AO00534 786 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 ATP2B1P20020 1258 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 CALML3P27482 149 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 SNAPC2Q13487 334 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 COG2Q14746 738 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 UBE2SQ16763 222 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 PIK3AP1Q6ZUJ8 805 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 BRAPQ7Z569 592 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 SAPCD2Q86UD0 394 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 RGS22Q8NE09 1264 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 TNFRSF25Q93038 417 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 USP28Q96RU2 1077 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 C6orf50Q9HD87 102 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
SNAP47-213ENST00000617596 PCDHA6Q9UN73 950 aa18.64■□□□□ 0.57
SNAP47-213ENST00000617596 PCDHA8Q9Y5H6 950 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms