RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 A0A0G2JLL6 359 aaPredicted RBP23.54■■□□□ 1.36
SDHA-220ENST00000617470 HTRA3P83110 453 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 DEFB115Q30KQ5 88 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 FAM83BQ5T0W9 1011 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 CYP4F22Q6NT55 531 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 PRRT2Q7Z6L0 340 aaPredicted RBP23.54■■□□□ 1.36
SDHA-220ENST00000617470 DCAF4Q8WV16 495 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 LPAR1Q92633 364 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 CCDC102AQ96A19 550 aa23.54■■□□□ 1.36
SDHA-220ENST00000617470 SLC10A3P09131 477 aa23.53■■□□□ 1.36
SDHA-220ENST00000617470 BMP3P12645 472 aa23.53■■□□□ 1.36
SDHA-220ENST00000617470 VCAM1P19320 739 aa23.53■■□□□ 1.36
SDHA-220ENST00000617470 GTF2A2P52657 109 aa23.53■■□□□ 1.36
SDHA-220ENST00000617470 IKQ13123 557 aaPredicted RBP23.53■■□□□ 1.36
SDHA-220ENST00000617470 SAMD1Q6SPF0 538 aaPredicted RBP23.53■■□□□ 1.36
SDHA-220ENST00000617470 DIS3L2Q8IYB7 885 aaKnown RBP23.53■■□□□ 1.36
SDHA-220ENST00000617470 GMCL1Q96IK5 515 aa23.53■■□□□ 1.36
SDHA-220ENST00000617470 HHIPL1Q96JK4 782 aa23.53■■□□□ 1.36
SDHA-220ENST00000617470 MAP3K14Q99558 947 aa23.53■■□□□ 1.36
SDHA-220ENST00000617470 KIF5BP33176 963 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 ME1P48163 572 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 GRM4Q14833 912 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 SH3D19Q5HYK7 790 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 NOSTRINQ8IVI9 506 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 CCAR1Q8IX12 1150 aaKnown RBP23.52■■□□□ 1.36
SDHA-220ENST00000617470 TANGO6Q9C0B7 1094 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 NUP62CLQ9H1M0 184 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 DDX19AQ9NUU7 478 aaKnown RBP23.52■■□□□ 1.36
SDHA-220ENST00000617470 STK38Q15208 465 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 STAG2Q8N3U4 1231 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 OXER1Q8TDS5 423 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 CLSTN2Q9H4D0 955 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 MAD2L2Q9UI95 211 aa23.52■■□□□ 1.36
SDHA-220ENST00000617470 CCL15-CCL14A0A0B4J2E2 113 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 WDR46O15213 610 aaKnown RBP23.51■■□□□ 1.35
SDHA-220ENST00000617470 SPTLC2O15270 562 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 SNHG28P0DPA3 235 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 CETPP11597 493 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 ZNF543Q08ER8 600 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 PTPAQ15257 358 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 CAMK4Q16566 473 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 CCL15Q16663 113 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 KCNG4Q8TDN1 519 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 C12orf42Q96LP6 360 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 FOXP1Q9H334 677 aaPredicted RBP23.51■■□□□ 1.35
SDHA-220ENST00000617470 RPAP3Q9H6T3 665 aaPredicted RBP23.51■■□□□ 1.35
SDHA-220ENST00000617470 VPS54Q9P1Q0 977 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 TMEM232C9JQI7 657 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 AKAP17AQ02040 695 aaKnown RBP23.51■■□□□ 1.35
SDHA-220ENST00000617470 SNW1Q13573 536 aaKnown RBP23.51■■□□□ 1.35
SDHA-220ENST00000617470 GNL2Q13823 731 aaKnown RBP23.51■■□□□ 1.35
SDHA-220ENST00000617470 SLC39A14Q15043 492 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 SF3A1Q15459 793 aaKnown RBP23.51■■□□□ 1.35
SDHA-220ENST00000617470 ASPRV1Q53RT3 343 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 ADALQ6DHV7 355 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 FASTKD5Q7L8L6 764 aaKnown RBP23.51■■□□□ 1.35
SDHA-220ENST00000617470 ENGASEQ8NFI3 743 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 PHF20Q9BVI0 1012 aa23.51■■□□□ 1.35
SDHA-220ENST00000617470 RASSF10A6NK89 507 aa23.5■■□□□ 1.35
SDHA-220ENST00000617470 FAM155AB1AL88 458 aaPredicted RBP23.5■■□□□ 1.35
SDHA-220ENST00000617470 TOB1P50616 345 aaPredicted RBP23.5■■□□□ 1.35
SDHA-220ENST00000617470 NR5A1Q13285 461 aa23.5■■□□□ 1.35
SDHA-220ENST00000617470 SLC35G1Q2M3R5 365 aa23.5■■□□□ 1.35
SDHA-220ENST00000617470 TREML2Q5T2D2 321 aa23.5■■□□□ 1.35
SDHA-220ENST00000617470 GPATCH4Q5T3I0 446 aaKnown RBP23.5■■□□□ 1.35
SDHA-220ENST00000617470 TTBK2Q6IQ55 1244 aa23.5■■□□□ 1.35
SDHA-220ENST00000617470 RBM43Q6ZSC3 357 aaKnown RBP23.5■■□□□ 1.35
SDHA-220ENST00000617470 PROCA1Q8NCQ7 364 aaPredicted RBP23.5■■□□□ 1.35
SDHA-220ENST00000617470 MS4A4AQ96JQ5 239 aa23.5■■□□□ 1.35
SDHA-220ENST00000617470 KLRF2D3W0D1 207 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 C1QTNF8P60827 252 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 SAFBQ15424 915 aaKnown RBP eCLIP23.49■■□□□ 1.35
SDHA-220ENST00000617470 AXDND1Q5T1B0 1012 aaPredicted RBP23.49■■□□□ 1.35
SDHA-220ENST00000617470 RNF214Q8ND24 703 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 UBA5Q9GZZ9 404 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 CPVLQ9H3G5 476 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 A0A1W2PQ27 194 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 A0A1W2PQ64 194 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 A0A1W2PQD8 194 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 PALM3A6NDB9 673 aaPredicted RBP23.49■■□□□ 1.35
SDHA-220ENST00000617470 SLC16A2P36021 539 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 NPY5RQ15761 445 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 CAPNS2Q96L46 248 aa23.49■■□□□ 1.35
SDHA-220ENST00000617470 BAZ2BQ9UIF8 2168 aaKnown RBP23.49■■□□□ 1.35
SDHA-220ENST00000617470 PTPRFP10586 1907 aa23.48■■□□□ 1.35
SDHA-220ENST00000617470 FSIP1Q8NA03 581 aa23.48■■□□□ 1.35
SDHA-220ENST00000617470 BRI3BPQ8WY22 251 aa23.48■■□□□ 1.35
SDHA-220ENST00000617470 GNAQP50148 359 aa23.47■■□□□ 1.35
SDHA-220ENST00000617470 TNMDQ9H2S6 317 aa23.47■■□□□ 1.35
SDHA-220ENST00000617470 FBXO28Q9NVF7 368 aa23.47■■□□□ 1.35
SDHA-220ENST00000617470 MANSC4A6NHS7 340 aaPredicted RBP23.47■■□□□ 1.35
SDHA-220ENST00000617470 FLOT1O75955 427 aa23.47■■□□□ 1.35
SDHA-220ENST00000617470 STAT2P52630 851 aa23.47■■□□□ 1.35
SDHA-220ENST00000617470 MOGSQ13724 837 aa23.47■■□□□ 1.35
SDHA-220ENST00000617470 VAT1LQ9HCJ6 419 aa23.47■■□□□ 1.35
SDHA-220ENST00000617470 AGTPBP1Q9UPW5 1226 aa23.47■■□□□ 1.35
SDHA-220ENST00000617470 USP17L15C9J2P7 530 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 USP17L13C9JLJ4 530 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 USP17L11C9JVI0 530 aa23.46■■□□□ 1.35
SDHA-220ENST00000617470 USP17L18D6R9N7 530 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms