RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 VWA5AO00534 786 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 ZBTB5O15062 677 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 PLA2G6O60733 806 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 PPP1R11O60927 126 aaPredicted RBP10.54□□□□□ -0.72
MMP28-205ENST00000615317 GJB2P29033 226 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 AKAP17AQ02040 695 aaKnown RBP10.54□□□□□ -0.72
MMP28-205ENST00000615317 SSRP1Q08945 709 aaKnown RBP10.54□□□□□ -0.72
MMP28-205ENST00000615317 PLS1Q14651 629 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 COG2Q14746 738 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 WWC2Q6AWC2 1192 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 CPXCR1Q8N123 301 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 REPS2Q8NFH8 660 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 SMARCC2Q8TAQ2 1214 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 RAVER2Q9HCJ3 691 aaKnown RBP10.54□□□□□ -0.72
MMP28-205ENST00000615317 ORC3Q9UBD5 711 aaPredicted RBP10.54□□□□□ -0.72
MMP28-205ENST00000615317 SMC3Q9UQE7 1217 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 CTDP1Q9Y5B0 961 aaPredicted RBP10.54□□□□□ -0.72
MMP28-205ENST00000615317 ZNF536O15090 1300 aa10.54□□□□□ -0.72
MMP28-205ENST00000615317 ZBED4O75132 1171 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 CNMDO75829 334 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 DEXIO95424 95 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 SCG2P13521 617 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 CRHR2Q13324 411 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 SNRNP48Q6IEG0 339 aaKnown RBP10.53□□□□□ -0.72
MMP28-205ENST00000615317 POTEEQ6S8J3 1075 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 PRPF38AQ8NAV1 312 aaKnown RBP10.53□□□□□ -0.72
MMP28-205ENST00000615317 FAM184AQ8NB25 1140 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 MTMR8Q96EF0 704 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 P2RX7Q99572 595 aaKnown RBP10.53□□□□□ -0.72
MMP28-205ENST00000615317 LLPHQ9BRT6 129 aaKnown RBP10.53□□□□□ -0.72
MMP28-205ENST00000615317 SLC38A10Q9HBR0 1119 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 TXNRD2Q9NNW7 524 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 HOMER2Q9NSB8 354 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 VPS54Q9P1Q0 977 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 BTBD7Q9P203 1132 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 ZNF214Q9UL59 606 aaPredicted RBP10.53□□□□□ -0.72
MMP28-205ENST00000615317 CCPG1Q9ULG6 757 aa10.53□□□□□ -0.72
MMP28-205ENST00000615317 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.53□□□□□ -0.72
MMP28-205ENST00000615317 V9GY48 417 aaPredicted RBP10.53□□□□□ -0.72
MMP28-205ENST00000615317 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.72
MMP28-205ENST00000615317 PNMA6FA0A0J9YX94 578 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 PRPF3O43395 683 aaKnown RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 ECM2O94769 699 aaPredicted RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 ICAM1P05362 532 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 FDPSP14324 419 aaKnown RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 SMARCA1P28370 1054 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 TM4SF4P48230 202 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 HMGN5P82970 282 aaKnown RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 TMEM132BQ14DG7 1078 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 PKN1Q16512 942 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 PFKFB3Q16875 520 aaPredicted RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 OTUD7BQ6GQQ9 843 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 TYW1BQ6NUM6 668 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 LBX2Q6XYB7 198 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 FBXO11Q86XK2 927 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 ANKRD13CQ8N6S4 541 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 GTF3C2Q8WUA4 911 aaPredicted RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 SHISA4Q96DD7 197 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 AGBL1Q96MI9 1066 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 ALG1Q9BT22 464 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 TEX13BQ9BXU2 312 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 ZCCHC17Q9NP64 241 aaKnown RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 GJB4Q9NTQ9 266 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 RBM27Q9P2N5 1060 aaKnown RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 CPA4Q9UI42 421 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 ZNFX1Q9P2E3 1918 aaKnown RBP10.52□□□□□ -0.73
MMP28-205ENST00000615317 MCM3APO60318 1980 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 CASP8AP2Q9UKL3 1982 aa10.52□□□□□ -0.73
MMP28-205ENST00000615317 STXBP3O00186 592 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 ALAS1P13196 640 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 MAP2K2P36507 400 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 NAPAP54920 295 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 INHBEP58166 350 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 ERVK-9P63128 1117 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 ERVK-24P63145 666 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 GUCY1B3Q02153 619 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 MB21D1Q8N884 522 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 COA7Q96BR5 231 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 INTS4Q96HW7 963 aaKnown RBP10.51□□□□□ -0.73
MMP28-205ENST00000615317 AMNQ9BXJ7 453 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 SPATC1LQ9H0A9 340 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 ZFYVE28Q9HCC9 887 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 RNF146Q9NTX7 359 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 ADAMTS5Q9UNA0 930 aa10.51□□□□□ -0.73
MMP28-205ENST00000615317 DOCK3Q8IZD9 2030 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 hCG_1984214I3L0E3 225 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 NFIBO00712 420 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 GCLCP48506 637 aaPredicted RBP10.5□□□□□ -0.73
MMP28-205ENST00000615317 OAZ1P54368 228 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 FAM110CQ1W6H9 321 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 WDR78Q5VTH9 848 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 PPP1R18Q6NYC8 613 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 ZNF713Q8N859 430 aaPredicted RBP10.5□□□□□ -0.73
MMP28-205ENST00000615317 CCDC148Q8NFR7 591 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 WASF1Q92558 559 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 C8orf76Q96K31 380 aa10.5□□□□□ -0.73
MMP28-205ENST00000615317 MOV10L1Q9BXT6 1211 aaKnown RBP10.5□□□□□ -0.73
MMP28-205ENST00000615317 BARHL2Q9NY43 387 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms