RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 IGKV6D-41A0A0C4DH26 115 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 A0A0U1RQJ8 604 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PPP1R3GB7ZBB8 358 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 GTPBP6O43824 516 aaPredicted RBP12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SERPINB2P05120 415 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FKBP1AP62942 108 aaKnown RBP12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 IL17AQ16552 155 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FAM47AQ5JRC9 791 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ATRIPQ8WXE1 791 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PARD6BQ9BYG5 372 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PHLPP2Q6ZVD8 1323 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 STXBP3O00186 592 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 STX10O60499 249 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 NMT2O60551 498 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 USP5P45974 858 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PTGDRQ13258 359 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 KCNB1Q14721 858 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CCDC93Q567U6 631 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 AK8Q96MA6 479 aa12.24□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 LOC102724159A0A0B4J2E5 919 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 GOLGA6L9A6NEM1 432 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ZMYND10O75800 440 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SNHG28P0DPA3 235 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 EVX2Q03828 476 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 GABPAQ06546 454 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FMR1Q06787 632 aaKnown RBP eCLIP12.23□□□□□ -0.454e-7■■□□□ 12.7
SENP3-EIF4A1-201ENST00000614237 PWP2Q15269 919 aaKnown RBP12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SEPT12Q8IYM1 358 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TBC1D16Q8TBP0 767 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 DHX58Q96C10 678 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ADAM21Q9UKJ8 722 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 WNT7AO00755 349 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 NLRP5P59047 1200 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MRPS25P82663 173 aaKnown RBP12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SLC35G1Q2M3R5 365 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TTC19Q6DKK2 380 aaPredicted RBP12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 COA1Q9GZY4 146 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 RMND1Q9NWS8 449 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PCDHA6Q9UN73 950 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PCDHA8Q9Y5H6 950 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ARHGAP6O43182 974 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 KIF4BQ2VIQ3 1234 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 USP49Q70CQ1 688 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ZNF444Q8N0Y2 327 aaPredicted RBP12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TXLNBQ8N3L3 684 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PANX2Q96RD6 677 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TMEM47Q9BQJ4 181 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 NAA15Q9BXJ9 866 aaKnown RBP12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 RIOX1Q9H6W3 641 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 RWDD2AQ9UIY3 292 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MYH8P13535 1937 aa12.23□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FLT1P17948 1338 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 AFF2P51816 1311 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 COL11A2P13942 1736 aaPredicted RBP12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SPECC1LQ69YQ0 1117 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SMIM5Q71RC9 77 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 EPSTI1Q96J88 318 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 LIMA1Q9UHB6 759 aaKnown RBP12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 RRP15Q9Y3B9 282 aaKnown RBP12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 H3BQF6 201 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 H2AFXP16104 143 aaPredicted RBP12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CDK8P49336 464 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TOGARAM2Q6ZUX3 1019 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 GRAMD1CQ8IYS0 662 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FAN1Q9Y2M0 1017 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 NFE2L3Q9Y4A8 694 aa12.22□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CYTH3O43739 400 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 NPM3O75607 178 aaKnown RBP12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TSPY3P0CV98 308 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 TSPY8P0CW00 308 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 BTDP43251 543 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 GRIK5Q16478 980 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 PPP1R18Q6NYC8 613 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 MKNK2Q9HBH9 465 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 SLC26A4O43511 780 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 ZNF658Q5TYW1 1059 aaPredicted RBP12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FOXR2Q6PJQ5 311 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 CCDC51Q96ER9 411 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 POLLQ9UGP5 575 aa12.21□□□□□ -0.45
SENP3-EIF4A1-201ENST00000614237 FANCGO15287 622 aa12.21□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 HSP90B2PQ58FF3 399 aa12.21□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CC2D1AQ6P1N0 951 aaPredicted RBP12.21□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CNNM4Q6P4Q7 775 aa12.21□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 KRT25Q7Z3Z0 450 aa12.21□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 CWC15Q9P013 229 aaKnown RBP12.21□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ADD3Q9UEY8 706 aaKnown RBP12.21□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 SWAP70Q9UH65 585 aa12.21□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TBC1D8O95759 1140 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ZNF174Q15697 407 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 JAKMIP3Q5VZ66 844 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 REXO1L1PQ8IX06 675 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TC2NQ8N9U0 490 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 TGFBRAP1Q8WUH2 860 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 COL2A1P02458 1487 aaPredicted RBP12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 ZSCAN12O43309 604 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 UFL1O94874 794 aa12.2□□□□□ -0.46
SENP3-EIF4A1-201ENST00000614237 PPP1R2P41236 205 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms