RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 MYSM1Q5VVJ2 828 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 CPLX2Q6PUV4 134 aaKnown RBP11.3□□□□□ -0.6
GGA3-221ENST00000614198 ACER1Q8TDN7 264 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 UBXN6Q9BZV1 441 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 PSME4Q14997 1843 aa11.3□□□□□ -0.6
GGA3-221ENST00000614198 CDKL5O76039 1030 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 MMP1P03956 469 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 PDHBP11177 359 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 RASA3Q14644 834 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 SF3A1Q15459 793 aaKnown RBP11.29□□□□□ -0.6
GGA3-221ENST00000614198 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 PIGSQ96S52 555 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.29□□□□□ -0.6
GGA3-221ENST00000614198 DDX19AQ9NUU7 478 aaKnown RBP11.29□□□□□ -0.6
GGA3-221ENST00000614198 CCZ1BP86790 482 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 CCZ1P86791 482 aaPredicted RBP11.29□□□□□ -0.6
GGA3-221ENST00000614198 GPS2Q13227 327 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 SPDYE2Q495Y8 402 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 COA7Q96BR5 231 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 PCDHB6Q9Y5E3 794 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 POLR2AP24928 1970 aaKnown RBP11.29□□□□□ -0.6
GGA3-221ENST00000614198 A0A1B0GVL5 298 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 ATP8B1O43520 1251 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 DEXIO95424 95 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 PCP11498 1178 aaKnown RBP11.29□□□□□ -0.6
GGA3-221ENST00000614198 ME1P48163 572 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 GTF2A1P52655 376 aaPredicted RBP11.29□□□□□ -0.6
GGA3-221ENST00000614198 HIRAP54198 1017 aaPredicted RBP11.29□□□□□ -0.6
GGA3-221ENST00000614198 FKBP1AP62942 108 aaKnown RBP11.29□□□□□ -0.6
GGA3-221ENST00000614198 CLSTN2Q9H4D0 955 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 MYH15Q9Y2K3 1946 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
GGA3-221ENST00000614198 FZD9O00144 591 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 DDAH1O94760 285 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 TRIM29Q14134 588 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 ZSCAN26Q16670 478 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 ICE2Q659A1 982 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 WWC2Q6AWC2 1192 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 FAM177A1Q8N128 213 aaPredicted RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 CWC15Q9P013 229 aaKnown RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 HACL1Q9UJ83 578 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 HDAC9Q9UKV0 1011 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 PCDHA7Q9UN72 937 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 IGKV6D-41A0A0C4DH26 115 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 GRM4Q14833 912 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 TMCO3Q6UWJ1 677 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 SMARCE1Q969G3 411 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 ARGLU1Q9NWB6 273 aaPredicted RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 CCDC196A0A1B0GTZ2 297 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 ARHGAP29Q52LW3 1261 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 NBPF12Q5TAG4 269 aaPredicted RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 SOGA3Q5TF21 947 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 C10orf67Q8IYJ2 551 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 MRIQ9BWK5 157 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
GGA3-221ENST00000614198 TCP11L1Q9NUJ3 509 aa11.28□□□□□ -0.6
GGA3-221ENST00000614198 TRIM66O15016 1216 aa11.27□□□□□ -0.6
GGA3-221ENST00000614198 PRPF3O43395 683 aaKnown RBP11.27□□□□□ -0.6
GGA3-221ENST00000614198 TTLL1O95922 423 aa11.27□□□□□ -0.6
GGA3-221ENST00000614198 PARP1P09874 1014 aaKnown RBP11.27□□□□□ -0.6
GGA3-221ENST00000614198 CCDC96Q2M329 555 aa11.27□□□□□ -0.6
GGA3-221ENST00000614198 ABCB5Q2M3G0 1257 aa11.27□□□□□ -0.6
GGA3-221ENST00000614198 AGBL3Q8NEM8 1001 aa11.27□□□□□ -0.6
GGA3-221ENST00000614198 RNF26Q9BY78 433 aaPredicted RBP11.27□□□□□ -0.6
GGA3-221ENST00000614198 RNF181Q9P0P0 153 aa11.27□□□□□ -0.6
GGA3-221ENST00000614198 USP17L10C9JJH3 530 aa11.27□□□□□ -0.61
GGA3-221ENST00000614198 PPP1R11O60927 126 aaPredicted RBP11.27□□□□□ -0.61
GGA3-221ENST00000614198 TOP1P11387 765 aaKnown RBP11.27□□□□□ -0.61
GGA3-221ENST00000614198 SCG2P13521 617 aa11.27□□□□□ -0.61
GGA3-221ENST00000614198 ANGEL2Q5VTE6 544 aaKnown RBP11.27□□□□□ -0.61
GGA3-221ENST00000614198 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
GGA3-221ENST00000614198 LCMT1Q9UIC8 334 aa11.27□□□□□ -0.61
GGA3-221ENST00000614198 NID2Q14112 1375 aa11.27□□□□□ -0.61
GGA3-221ENST00000614198 TUBB4AP04350 444 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 TATDN1Q6P1N9 297 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 TMED8Q6PL24 325 aaPredicted RBP11.26□□□□□ -0.61
GGA3-221ENST00000614198 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 NOSTRINQ8IVI9 506 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 LINC00301Q8NCQ3 95 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 PHF20Q9BVI0 1012 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 ZNF287Q9HBT7 754 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 BRMS1Q9HCU9 246 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.26□□□□□ -0.611e-6■■■■□ 19.3
GGA3-221ENST00000614198 SMC2O95347 1197 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 ICA1Q05084 483 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 SNW1Q13573 536 aaKnown RBP11.26□□□□□ -0.61
GGA3-221ENST00000614198 IQCB1Q15051 598 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 LRRN4CLQ8ND94 238 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 MNS1Q8NEH6 495 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 ANKS1AQ92625 1134 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 TMEM260Q9NX78 707 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 TMOD2Q9NZR1 351 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 NRDCO43847 1150 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 NLRP5P59047 1200 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 ZNF174Q15697 407 aa11.26□□□□□ -0.61
GGA3-221ENST00000614198 CCAR1Q8IX12 1150 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms