RNA–Protein interactions for RNA: ENST00000614056.4

PDCD2-215, Transcript of programmed cell death 2, human

TSL 2 BASIC

Gene PDCD2, Length 1,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD2-215	ENST00000614056	SLC1A4	P43007	532 aa		32.61	■■■□□ 2.81
PDCD2-215	ENST00000614056	IRX5	P78411	483 aa	Predicted RBP	32.61	■■■□□ 2.81
PDCD2-215	ENST00000614056	KCNA10	Q16322	511 aa		32.61	■■■□□ 2.81
PDCD2-215	ENST00000614056	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	32.61	■■■□□ 2.81	1e-8	■■□□□ 14
PDCD2-215	ENST00000614056	ARMCX2	Q7L311	632 aa		32.61	■■■□□ 2.81
PDCD2-215	ENST00000614056	SALL3	Q9BXA9	1300 aa		32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	ADCY6	O43306	1168 aa		32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	RAG1	P15918	1043 aa		32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	KLHDC9	Q8NEP7	349 aa		32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	NUP133	Q8WUM0	1156 aa		32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	AGBL1	Q96MI9	1066 aa		32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	TMEM39A	Q9NV64	488 aa		32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	MTMR7	Q9Y216	660 aa		32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	32.6	■■■□□ 2.81
PDCD2-215	ENST00000614056	NMT2	O60551	498 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	DUSP11	O75319	330 aa	Known RBP	32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	C6orf222	P0C671	652 aa	Predicted RBP	32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	CNTN2	Q02246	1040 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	CCDC144B	Q3MJ40	725 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	KCTD1	Q719H9	257 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	RASGRP2	Q7LDG7	609 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	FAM160B2	Q86V87	743 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	CHURC1	Q8WUH1	139 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	STAG1	Q8WVM7	1258 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	GMCL1	Q96IK5	515 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	CRBN	Q96SW2	442 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	ABHD16B	Q9H3Z7	469 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	ACAD9	Q9H845	621 aa		32.59	■■■□□ 2.81
PDCD2-215	ENST00000614056	MOXD2P	A6NHM9	499 aa		32.58	■■■□□ 2.81
PDCD2-215	ENST00000614056	FDX1	P10109	184 aa		32.58	■■■□□ 2.81
PDCD2-215	ENST00000614056	SNAP25	P60880	206 aa		32.58	■■■□□ 2.81
PDCD2-215	ENST00000614056	VPS53	Q5VIR6	699 aa		32.58	■■■□□ 2.81
PDCD2-215	ENST00000614056	CCDC144CP	Q8IYA2	1237 aa		32.58	■■■□□ 2.81
PDCD2-215	ENST00000614056	RNF146	Q9NTX7	359 aa		32.58	■■■□□ 2.81
PDCD2-215	ENST00000614056	KIAA0355	O15063	1070 aa		32.57	■■■□□ 2.8
PDCD2-215	ENST00000614056	EPHB4	P54760	987 aa		32.57	■■■□□ 2.8
PDCD2-215	ENST00000614056	CCDC174	Q6PII3	467 aa		32.57	■■■□□ 2.8
PDCD2-215	ENST00000614056	IL17RB	Q9NRM6	502 aa		32.57	■■■□□ 2.8
PDCD2-215	ENST00000614056	ZNF536	O15090	1300 aa		32.56	■■■□□ 2.8
PDCD2-215	ENST00000614056	DCDC2C	A8MYV0	355 aa		32.56	■■■□□ 2.8
PDCD2-215	ENST00000614056	RANBP6	O60518	1105 aa	Known RBP	32.56	■■■□□ 2.8
PDCD2-215	ENST00000614056	FAAP100	Q0VG06	881 aa		32.56	■■■□□ 2.8
PDCD2-215	ENST00000614056	PPP4R3B	Q5MIZ7	849 aa		32.56	■■■□□ 2.8
PDCD2-215	ENST00000614056	CCSAP	Q6IQ19	270 aa	Predicted RBP	32.56	■■■□□ 2.8
PDCD2-215	ENST00000614056	ALAS1	P13196	640 aa		32.55	■■■□□ 2.8
PDCD2-215	ENST00000614056	ANKRD33	Q7Z3H0	272 aa		32.55	■■■□□ 2.8
PDCD2-215	ENST00000614056	VTI1A	Q96AJ9	217 aa		32.55	■■■□□ 2.8
PDCD2-215	ENST00000614056	EVI5L	Q96CN4	794 aa		32.55	■■■□□ 2.8
PDCD2-215	ENST00000614056	SPC25	Q9HBM1	224 aa		32.55	■■■□□ 2.8
PDCD2-215	ENST00000614056	A1CF	Q9NQ94	594 aa	Known RBP	32.55	■■■□□ 2.8
PDCD2-215	ENST00000614056	ASGR1	P07306	291 aa		32.54	■■■□□ 2.8
PDCD2-215	ENST00000614056	RCSD1	Q6JBY9	416 aa		32.54	■■■□□ 2.8
PDCD2-215	ENST00000614056	RNPC3	Q96LT9	517 aa	Known RBP	32.54	■■■□□ 2.8
PDCD2-215	ENST00000614056	GLT1D1	Q96MS3	346 aa		32.54	■■■□□ 2.8
PDCD2-215	ENST00000614056	TOX2	Q96NM4	488 aa		32.54	■■■□□ 2.8
PDCD2-215	ENST00000614056	TRERF1	Q96PN7	1200 aa		32.54	■■■□□ 2.8
PDCD2-215	ENST00000614056	CST5	P28325	142 aa	Predicted RBP	32.53	■■■□□ 2.8
PDCD2-215	ENST00000614056	FPGS	Q05932	587 aa		32.53	■■■□□ 2.8
PDCD2-215	ENST00000614056	FAM133A	Q8N9E0	248 aa		32.53	■■■□□ 2.8
PDCD2-215	ENST00000614056	PCSK9	Q8NBP7	692 aa	Known RBP	32.53	■■■□□ 2.8
PDCD2-215	ENST00000614056	TOMM22	Q9NS69	142 aa		32.53	■■■□□ 2.8
PDCD2-215	ENST00000614056	GJA9	P57773	515 aa		32.52	■■■□□ 2.8
PDCD2-215	ENST00000614056	CCDC96	Q2M329	555 aa		32.52	■■■□□ 2.8
PDCD2-215	ENST00000614056	GNAS	Q5JWF2	1037 aa		32.52	■■■□□ 2.8
PDCD2-215	ENST00000614056	NOL8	Q76FK4	1167 aa	Known RBP	32.52	■■■□□ 2.8
PDCD2-215	ENST00000614056	KATNBL1	Q9H079	304 aa		32.52	■■■□□ 2.8
PDCD2-215	ENST00000614056	UPF3A	Q9H1J1	476 aa	Known RBP	32.52	■■■□□ 2.8
PDCD2-215	ENST00000614056	PRR12	Q9ULL5	1215 aa		32.52	■■■□□ 2.8
PDCD2-215	ENST00000614056	DDX49	Q9Y6V7	483 aa	Known RBP	32.52	■■■□□ 2.8
PDCD2-215	ENST00000614056	SOWAHB	A6NEL2	793 aa		32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	PDE1A	P54750	535 aa		32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	SMAD3	P84022	425 aa	Known RBP	32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	TKFC	Q3LXA3	575 aa		32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	FAM227B	Q96M60	508 aa		32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	SEMA6B	Q9H3T3	888 aa		32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	HELLS	Q9NRZ9	838 aa		32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	ANAPC4	Q9UJX5	808 aa		32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	LRRC37A2	A6NM11	1700 aa		32.51	■■■□□ 2.79
PDCD2-215	ENST00000614056	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	32.5	■■■□□ 2.79
PDCD2-215	ENST00000614056	PLA2G6	O60733	806 aa		32.5	■■■□□ 2.79
PDCD2-215	ENST00000614056	MUM1L1	Q5H9M0	696 aa		32.5	■■■□□ 2.79
PDCD2-215	ENST00000614056	RRP12	Q5JTH9	1297 aa	Known RBP	32.5	■■■□□ 2.79
PDCD2-215	ENST00000614056	CDX2	Q99626	313 aa	Predicted RBP	32.5	■■■□□ 2.79
PDCD2-215	ENST00000614056		A0A0C4DFX4	3053 aa		32.5	■■■□□ 2.79
PDCD2-215	ENST00000614056	ELP1	O95163	1332 aa		32.5	■■■□□ 2.79
PDCD2-215	ENST00000614056		A0A0D9SFI3	127 aa		32.49	■■■□□ 2.79
PDCD2-215	ENST00000614056	BEX3	Q00994	111 aa		32.49	■■■□□ 2.79
PDCD2-215	ENST00000614056	ASB14	A6NK59	587 aa		32.48	■■■□□ 2.79
PDCD2-215	ENST00000614056	ORC4	O43929	436 aa		32.48	■■■□□ 2.79
PDCD2-215	ENST00000614056	TNFAIP2	Q03169	654 aa		32.48	■■■□□ 2.79
PDCD2-215	ENST00000614056	CCPG1	Q9ULG6	757 aa		32.48	■■■□□ 2.79
PDCD2-215	ENST00000614056	MROH7	Q68CQ1	1323 aa		32.48	■■■□□ 2.79
PDCD2-215	ENST00000614056		A0A0U1RQG5	324 aa	Predicted RBP	32.47	■■■□□ 2.79
PDCD2-215	ENST00000614056	TIMP1	P01033	207 aa		32.47	■■■□□ 2.79
PDCD2-215	ENST00000614056	ALX1	Q15699	326 aa		32.47	■■■□□ 2.79
PDCD2-215	ENST00000614056	NSMF	Q6X4W1	530 aa		32.47	■■■□□ 2.79
PDCD2-215	ENST00000614056	TTYH1	Q9H313	450 aa	Predicted RBP	32.47	■■■□□ 2.79
PDCD2-215	ENST00000614056	TBX21	Q9UL17	535 aa		32.47	■■■□□ 2.79
PDCD2-215	ENST00000614056	LCT	P09848	1927 aa		32.47	■■■□□ 2.79
PDCD2-215	ENST00000614056	CTAGE5	O15320	804 aa		32.46	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms