RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 SLC16A2P36021 539 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 NOVP48745 357 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 ZNF543Q08ER8 600 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 SPP2Q13103 211 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 PKP1Q13835 747 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 ARHGEF6Q15052 776 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 NTRK3Q16288 839 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 TREML2Q5T2D2 321 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 GPATCH4Q5T3I0 446 aaKnown RBP9.69□□□□□ -0.86
PSMB3-208ENST00000613870 RASGRP2Q7LDG7 609 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 HEATR3Q7Z4Q2 680 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 FERMT3Q86UX7 667 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 SIAH1Q8IUQ4 282 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 DOCK3Q8IZD9 2030 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 ZNF280CQ8ND82 737 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 GMCL1P1Q8NEA9 526 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 GBP4Q96PP9 640 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 PARK7Q99497 189 aaKnown RBP9.69□□□□□ -0.86
PSMB3-208ENST00000613870 RNF26Q9BY78 433 aaPredicted RBP9.69□□□□□ -0.86
PSMB3-208ENST00000613870 CPVLQ9H3G5 476 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 STK36Q9NRP7 1315 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 RBM27Q9P2N5 1060 aaKnown RBP9.69□□□□□ -0.86
PSMB3-208ENST00000613870 SLC45A1Q9Y2W3 748 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 TMX2Q9Y320 296 aa9.69□□□□□ -0.86
PSMB3-208ENST00000613870 CNTNAP5Q8WYK1 1306 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 A0A1W2PRG0 241 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 TMEM232C9JQI7 657 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 FDPSP14324 419 aaKnown RBP9.68□□□□□ -0.86
PSMB3-208ENST00000613870 NCLP19338 710 aaKnown RBP9.68□□□□□ -0.86
PSMB3-208ENST00000613870 PSMC4P43686 418 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 KIF22Q14807 665 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 FAM83BQ5T0W9 1011 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 TTBK2Q6IQ55 1244 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 NBPF11Q86T75 865 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 TNPO1Q92973 898 aaKnown RBP9.68□□□□□ -0.86
PSMB3-208ENST00000613870 ARMC5Q96C12 935 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 GMCL1Q96IK5 515 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 AIFM3Q96NN9 605 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 TMOD4Q9NZQ9 345 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 AGTPBP1Q9UPW5 1226 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 MTMR6Q9Y217 621 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 CTDP1Q9Y5B0 961 aaPredicted RBP9.68□□□□□ -0.86
PSMB3-208ENST00000613870 ATP6V1DQ9Y5K8 247 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 PDE4DIPQ5VU43 2346 aa9.68□□□□□ -0.86
PSMB3-208ENST00000613870 RBBP6Q7Z6E9 1792 aaKnown RBP9.68□□□□□ -0.86
PSMB3-208ENST00000613870 POTEFA5A3E0 1075 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 USP17L10C9JJH3 530 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 BRD1O95696 1058 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 F13A1P00488 732 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 GNRH1P01148 92 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 SCG2P13521 617 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 OSBPP22059 807 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 USP14P54578 494 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 HMGCS2P54868 508 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 NLRP5P59047 1200 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 MTMR2Q13614 643 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 PROCA1Q8NCQ7 364 aaPredicted RBP9.67□□□□□ -0.86
PSMB3-208ENST00000613870 KIFC2Q96AC6 838 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 ZNF333Q96JL9 665 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 WDR18Q9BV38 432 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 SPZ1Q9BXG8 430 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 TANGO6Q9C0B7 1094 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 VCPKMTQ9H867 229 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 BRMS1Q9HCU9 246 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 GJB4Q9NTQ9 266 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 VPS54Q9P1Q0 977 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 SRRDQ9UH36 339 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 SYNPO2Q9UMS6 1093 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 KCNJ14Q9UNX9 436 aa9.67□□□□□ -0.86
PSMB3-208ENST00000613870 GOLGA6L22H0YM25 854 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 SNHG28P0DPA3 235 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 NAPAP54920 295 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 PRMT2P55345 433 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 BACE1P56817 501 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 FUT2Q10981 343 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 PFKFB3Q16875 520 aaPredicted RBP9.66□□□□□ -0.86
PSMB3-208ENST00000613870 SLC9C1Q4G0N8 1177 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 SYDE2Q5VT97 1194 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 KRT40Q6A162 431 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 ADGRF4Q8IZF3 695 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 FBXO18Q8NFZ0 1043 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 SH3TC2Q8TF17 1288 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 CHURC1Q8WUH1 139 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
PSMB3-208ENST00000613870 PIGSQ96S52 555 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 KIAA1683Q9H0B3 1180 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 ZDHHC9Q9Y397 364 aa9.66□□□□□ -0.86
PSMB3-208ENST00000613870 C19orf81C9J6K1 198 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 SMARCA1P28370 1054 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 STAT2P52630 851 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 SNAP25P60880 206 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 FAM160B2Q86V87 743 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 CCDC148Q8NFR7 591 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 SMCR8Q8TEV9 937 aaPredicted RBP9.65□□□□□ -0.86
PSMB3-208ENST00000613870 CCDC12Q8WUD4 166 aaPredicted RBP9.65□□□□□ -0.86
PSMB3-208ENST00000613870 LPAR1Q92633 364 aa9.65□□□□□ -0.86
PSMB3-208ENST00000613870 ASCC2Q9H1I8 757 aaPredicted RBP9.65□□□□□ -0.86
PSMB3-208ENST00000613870 ZSCAN16Q9H4T2 348 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms