RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 LY9Q9HBG7 655 aa13.25□□□□□ -0.29
CCL3L3-201ENST00000612839 SH2B2O14492 632 aaPredicted RBP13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 ZBED4O75132 1171 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 FDX1P10109 184 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 EXOSC10Q01780 885 aaKnown RBP13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 IRF5Q13568 498 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 WDR78Q5VTH9 848 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 DHX32Q7L7V1 743 aaKnown RBP13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 PLEKHH3Q7Z736 793 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 NCAPG2Q86XI2 1143 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 RIOX2Q8IUF8 465 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 RAET1EQ8TD07 263 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 TEX13BQ9BXU2 312 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 LRRC2Q9BYS8 371 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 RIPK3Q9Y572 518 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 ZNF536O15090 1300 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 BRCA2P51587 3418 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 ZNF236Q9UL36 1845 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 ZNFX1Q9P2E3 1918 aaKnown RBP13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 SMCHD1A6NHR9 2005 aa13.24□□□□□ -0.29
CCL3L3-201ENST00000612839 SLC25A27O95847 323 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 PTPREP23469 700 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 LIFRP42702 1097 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 OAZ1P54368 228 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 SNAP25P60880 206 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 TROAPQ12815 778 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 GRB14Q14449 540 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 ASPRV1Q53RT3 343 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 MORN1Q5T089 497 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 SYDE2Q5VT97 1194 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 SNRNP48Q6IEG0 339 aaKnown RBP13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 STAG2Q8N3U4 1231 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 SOCS4Q8WXH5 440 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 USP6NLQ92738 828 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 TCEANC2Q96MN5 208 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 RANBP17Q9H2T7 1088 aaKnown RBP13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 CPVLQ9H3G5 476 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 MROH8Q9H579 483 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 WDR19Q8NEZ3 1342 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 PARP1P09874 1014 aaKnown RBP13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 CPA1P15085 419 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 C8orf34Q49A92 452 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 SH3TC2Q8TF17 1288 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 JAKMIP1Q96N16 626 aaKnown RBP13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 UBA5Q9GZZ9 404 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 OCEL1Q9H607 264 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 CTDP1Q9Y5B0 961 aaPredicted RBP13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 IVNS1ABPQ9Y6Y0 642 aa13.23□□□□□ -0.29
CCL3L3-201ENST00000612839 PALM3A6NDB9 673 aaPredicted RBP13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 SLC15A5A6NIM6 579 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 STRNO43815 780 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 ADCY3O60266 1144 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 ELNP15502 786 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 CYP2B6P20813 491 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 GRK4P32298 578 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 MAP2K5Q13163 448 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 GRM4Q14833 912 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 SLC9C1Q4G0N8 1177 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 SGMS1Q86VZ5 419 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 ZNF654Q8IZM8 581 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 TMTC2Q8N394 836 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 PXYLP1Q8TE99 480 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 ARMC5Q96C12 935 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 AGBL1Q96MI9 1066 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 MYL10Q9BUA6 226 aa13.22□□□□□ -0.29
CCL3L3-201ENST00000612839 MYH6P13533 1939 aa13.21□□□□□ -0.29
CCL3L3-201ENST00000612839 KLRF2D3W0D1 207 aa13.21□□□□□ -0.3
CCL3L3-201ENST00000612839 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.3
CCL3L3-201ENST00000612839 ADORA2AP29274 412 aa13.21□□□□□ -0.3
CCL3L3-201ENST00000612839 COPB2P35606 906 aa13.21□□□□□ -0.3
CCL3L3-201ENST00000612839 SLC4A3P48751 1232 aa13.21□□□□□ -0.3
CCL3L3-201ENST00000612839 ADGRF4Q8IZF3 695 aa13.21□□□□□ -0.3
CCL3L3-201ENST00000612839 ABRAQ8N0Z2 381 aa13.21□□□□□ -0.3
CCL3L3-201ENST00000612839 PLXNA1Q9UIW2 1896 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 CCDC69A6NI79 296 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 DDAH1O94760 285 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 ICAM1P05362 532 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 HOXC6P09630 235 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 FCER1AP12319 257 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 TAL1P17542 331 aaPredicted RBP13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 CASTP20810 708 aaKnown RBP13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 RPS6KB1P23443 525 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 PSMA5P28066 241 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 RGS2P41220 211 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 SLC35G1Q2M3R5 365 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 BLOC1S2Q6QNY1 142 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 NFXL1Q6ZNB6 911 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 NUP133Q8WUM0 1156 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 TRIB2Q92519 343 aa13.2□□□□□ -0.3
CCL3L3-201ENST00000612839 ZNF333Q96JL9 665 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms