RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 MAN1C1Q9NR34 630 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 PICK1Q9NRD5 415 aa11.84□□□□□ -0.51
CNTNAP3B-211ENST00000612828 TMEM247A6NEH6 219 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PRPF4O43172 522 aaKnown RBP eCLIP11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SLC25A24Q6NUK1 477 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IPCEF1Q8WWN9 437 aaPredicted RBP11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ATP6V0A4Q9HBG4 840 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RPH3AQ9Y2J0 694 aaPredicted RBP11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 UBE2HP62256 183 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SPATS2Q86XZ4 545 aaKnown RBP11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ASXL1Q8IXJ9 1541 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 NME8Q8N427 588 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 FAM71BQ8TC56 605 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 USP6NLQ92738 828 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CCDC142Q17RM4 750 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TTC25Q96NG3 672 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TEX14Q8IWB6 1497 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SMCO2A6NFE2 343 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ZNF568Q3ZCX4 644 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 HHATQ5VTY9 493 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 KIF17Q9P2E2 1029 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PTPRCP08575 1304 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 KPNA1P52294 538 aaPredicted RBP11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MECOMQ03112 1051 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IFIT5Q13325 482 aaKnown RBP11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DNAJC25Q9H1X3 360 aa11.83□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ST5P78524 1137 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SOX5P35711 763 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CEBPAP49715 358 aaPredicted RBP11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IFIH1Q9BYX4 1025 aaKnown RBP11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 LSG1Q9H089 658 aaKnown RBP11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 C6orf50Q9HD87 102 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DYTNA2CJ06 578 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 GPTP24298 496 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MCM5P33992 734 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 C8orf76Q96K31 380 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 FAM129BQ96TA1 746 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ANO10Q9NW15 660 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MAP3K2Q9Y2U5 619 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 KRT8P05787 483 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SND1Q7KZF4 910 aaKnown RBP eCLIP11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 EXT2Q93063 718 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MMS19Q96T76 1030 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 VPS16Q9H269 839 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SMARCAD1Q9H4L7 1026 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SELENONQ9NZV5 590 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 GOLGA8IPA6NC78 632 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PEX5P50542 639 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 AP2B1P63010 937 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 FASTKD5Q7L8L6 764 aaKnown RBP11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MRPS27Q92552 414 aaKnown RBP11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SLC4A9Q96Q91 983 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PCDHGA4Q9Y5G9 962 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TRIM64BA6NI03 449 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 OSBPP22059 807 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TSNAXIP1Q2TAA8 658 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PMM1Q92871 262 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IQCDQ96DY2 449 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 STRIP2Q9ULQ0 834 aa11.82□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RNASELQ05823 741 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 GCNAQ96QF7 691 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CYTH2Q99418 400 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MTRF1LQ9UGC7 380 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PRG3Q9Y2Y8 225 aaPredicted RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ANKRD36BQ8N2N9 1353 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 CREB3O43889 395 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PEX1O43933 1283 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MTRF1O75570 445 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 GJA1P17302 382 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TOMM20Q15388 145 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RASSF10A6NK89 507 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 SYCE1LA8MT33 242 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 RHOBTB1O94844 696 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 AK2P54819 239 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ESRP1Q6NXG1 681 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 LRFN2Q9ULH4 789 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 F13A1P00488 732 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 NCAM1P13591 858 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PKP1Q13835 747 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 VN1R5Q7Z5H4 357 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ADCK1Q86TW2 530 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IQCF2Q8IXL9 164 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 FAM178BQ8IXR5 827 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 HS6ST3Q8IZP7 471 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 JAG2Q9Y219 1238 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PIK3C2GO75747 1445 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 ACEP12821 1306 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TCOF1Q13428 1488 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 GNG11P61952 73 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 NSUN2Q08J23 767 aaKnown RBP eCLIP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 EIF4A2Q14240 407 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 PLEKHA5Q9HAU0 1116 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 TMOD4Q9NZQ9 345 aa11.81□□□□□ -0.52
CNTNAP3B-211ENST00000612828 YARSP54577 528 aaKnown RBP11.8□□□□□ -0.52
CNTNAP3B-211ENST00000612828 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms