RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 GJA9P57773 515 aa28.06■■■□□ 2.08
MMP28-203ENST00000612672 ARMCX2Q7L311 632 aa28.06■■■□□ 2.08
MMP28-203ENST00000612672 GLT1D1Q96MS3 346 aa28.06■■■□□ 2.08
MMP28-203ENST00000612672 CLIP2Q9UDT6 1046 aa28.06■■■□□ 2.08
MMP28-203ENST00000612672 DDX19BQ9UMR2 479 aa28.06■■■□□ 2.08
MMP28-203ENST00000612672 DDX49Q9Y6V7 483 aaKnown RBP28.06■■■□□ 2.08
MMP28-203ENST00000612672 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.05■■■□□ 2.08
MMP28-203ENST00000612672 MINDY4BA8MYZ0 360 aa28.05■■■□□ 2.08
MMP28-203ENST00000612672 TJAP1Q5JTD0 557 aa28.05■■■□□ 2.08
MMP28-203ENST00000612672 LRRC47Q8N1G4 583 aaKnown RBP28.05■■■□□ 2.08
MMP28-203ENST00000612672 PRDM12Q9H4Q4 367 aa28.05■■■□□ 2.08
MMP28-203ENST00000612672 UMODL1Q5DID0 1318 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 ARVCFO00192 962 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 BEX3Q00994 111 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 CNTN2Q02246 1040 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 PPIGQ13427 754 aaKnown RBP eCLIP28.04■■■□□ 2.08
MMP28-203ENST00000612672 ADGRE1Q14246 886 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 TSHZ3Q63HK5 1081 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 ZNF365Q70YC5 407 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 CCDC144CPQ8IYA2 1237 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 CEP95Q96GE4 821 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 ABHD16BQ9H3Z7 469 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 MKNK2Q9HBH9 465 aa28.04■■■□□ 2.08
MMP28-203ENST00000612672 NCOR1O75376 2440 aa28.03■■■□□ 2.08
MMP28-203ENST00000612672 MROH7Q68CQ1 1323 aa28.03■■■□□ 2.08
MMP28-203ENST00000612672 A0A0U1RQG5 324 aaPredicted RBP28.03■■■□□ 2.08
MMP28-203ENST00000612672 ZBED4O75132 1171 aa28.03■■■□□ 2.08
MMP28-203ENST00000612672 CYP2C18P33260 490 aa28.03■■■□□ 2.08
MMP28-203ENST00000612672 ZSCAN25Q6NSZ9 544 aa28.03■■■□□ 2.08
MMP28-203ENST00000612672 ANKRD35Q8N283 1001 aa28.03■■■□□ 2.08
MMP28-203ENST00000612672 PPM1EQ8WY54 764 aa28.03■■■□□ 2.08
MMP28-203ENST00000612672 SYMPKQ92797 1274 aaKnown RBP28.03■■■□□ 2.08
MMP28-203ENST00000612672 CXXC1Q9P0U4 656 aaPredicted RBP28.03■■■□□ 2.08
MMP28-203ENST00000612672 M0R2C6 588 aa28.02■■■□□ 2.08
MMP28-203ENST00000612672 CD4P01730 458 aa28.02■■■□□ 2.08
MMP28-203ENST00000612672 PCSK9Q8NBP7 692 aaKnown RBP28.02■■■□□ 2.08
MMP28-203ENST00000612672 HOMER2Q9NSB8 354 aa28.02■■■□□ 2.08
MMP28-203ENST00000612672 GNASQ5JWF2 1037 aa28.01■■■□□ 2.07
MMP28-203ENST00000612672 MKL1Q969V6 931 aa28.01■■■□□ 2.07
MMP28-203ENST00000612672 MTMR4Q9NYA4 1195 aa28.01■■■□□ 2.07
MMP28-203ENST00000612672 GIMAP6Q6P9H5 292 aa28■■■□□ 2.07
MMP28-203ENST00000612672 CCDC129Q6ZRS4 1044 aa28■■■□□ 2.07
MMP28-203ENST00000612672 MIER1Q8N108 512 aa28■■■□□ 2.07
MMP28-203ENST00000612672 FAM133AQ8N9E0 248 aa28■■■□□ 2.07
MMP28-203ENST00000612672 VTI1AQ96AJ9 217 aa28■■■□□ 2.07
MMP28-203ENST00000612672 LRRCC1Q9C099 1032 aa28■■■□□ 2.07
MMP28-203ENST00000612672 ZNF536O15090 1300 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 GRIN2DO15399 1336 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 SOWAHBA6NEL2 793 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 GPAA1O43292 621 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 NKX3-2P78367 333 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 TMEM63BQ5T3F8 832 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 KBTBD3Q8NAB2 608 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 CHST13Q8NET6 341 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 APPBP2Q92624 585 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 CHMP4CQ96CF2 233 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 FEM1BQ9UK73 627 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 YBX2Q9Y2T7 364 aaKnown RBP27.99■■■□□ 2.07
MMP28-203ENST00000612672 PLIN4Q96Q06 1357 aa27.99■■■□□ 2.07
MMP28-203ENST00000612672 TNFRSF10AO00220 468 aa27.98■■■□□ 2.07
MMP28-203ENST00000612672 PSRC1Q6PGN9 363 aaPredicted RBP27.98■■■□□ 2.07
MMP28-203ENST00000612672 CXCL17Q6UXB2 119 aa27.98■■■□□ 2.07
MMP28-203ENST00000612672 RASGRP2Q7LDG7 609 aa27.98■■■□□ 2.07
MMP28-203ENST00000612672 TMEM199Q8N511 208 aa27.98■■■□□ 2.07
MMP28-203ENST00000612672 SLC43A3Q8NBI5 491 aa27.98■■■□□ 2.07
MMP28-203ENST00000612672 A1CFQ9NQ94 594 aaKnown RBP27.98■■■□□ 2.07
MMP28-203ENST00000612672 RAPGEFL1Q9UHV5 662 aa27.98■■■□□ 2.07
MMP28-203ENST00000612672 MS4A1P11836 297 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 C20orf194Q5TEA3 1177 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 GMCL1P1Q8NEA9 526 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 VWCEQ96DN2 955 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 AGBL1Q96MI9 1066 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 SPC25Q9HBM1 224 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 IL23AQ9NPF7 189 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 ECHDC1Q9NTX5 307 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 FBXO40Q9UH90 709 aa27.97■■■□□ 2.07
MMP28-203ENST00000612672 GNEQ9Y223 722 aaKnown RBP27.97■■■□□ 2.07
MMP28-203ENST00000612672 CTDP1Q9Y5B0 961 aaPredicted RBP27.97■■■□□ 2.07
MMP28-203ENST00000612672 OAZ1P54368 228 aa27.96■■■□□ 2.07
MMP28-203ENST00000612672 SLFN13Q68D06 897 aa27.96■■■□□ 2.07
MMP28-203ENST00000612672 HERVK_113Q902F9 699 aa27.96■■■□□ 2.07
MMP28-203ENST00000612672 GAS2L1Q99501 681 aaPredicted RBP27.96■■■□□ 2.07
MMP28-203ENST00000612672 NKX2-4Q9H2Z4 354 aa27.96■■■□□ 2.07
MMP28-203ENST00000612672 SCN5AQ14524 2016 aa27.96■■■□□ 2.07
MMP28-203ENST00000612672 RNF113AO15541 343 aaKnown RBP27.95■■■□□ 2.06
MMP28-203ENST00000612672 TTLL1O95922 423 aa27.95■■■□□ 2.06
MMP28-203ENST00000612672 BMP3P12645 472 aa27.95■■■□□ 2.06
MMP28-203ENST00000612672 TDO2P48775 406 aa27.95■■■□□ 2.06
MMP28-203ENST00000612672 AKNAD1Q5T1N1 836 aa27.95■■■□□ 2.06
MMP28-203ENST00000612672 SEC62Q99442 399 aaKnown RBP27.95■■■□□ 2.06
MMP28-203ENST00000612672 WNT8AQ9H1J5 351 aa27.95■■■□□ 2.06
MMP28-203ENST00000612672 RNF146Q9NTX7 359 aa27.95■■■□□ 2.06
MMP28-203ENST00000612672 TMEM232C9JQI7 657 aa27.94■■■□□ 2.06
MMP28-203ENST00000612672 SNAP25P60880 206 aa27.94■■■□□ 2.06
MMP28-203ENST00000612672 TNFAIP2Q03169 654 aa27.94■■■□□ 2.06
MMP28-203ENST00000612672 CCDC85BQ15834 202 aaPredicted RBP27.94■■■□□ 2.06
MMP28-203ENST00000612672 ZNF444Q8N0Y2 327 aaPredicted RBP27.94■■■□□ 2.06
MMP28-203ENST00000612672 ACAD9Q9H845 621 aa27.94■■■□□ 2.06
MMP28-203ENST00000612672 PDGFCQ9NRA1 345 aa27.94■■■□□ 2.06
MMP28-203ENST00000612672 TCF20Q9UGU0 1960 aaKnown RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms