RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ZSWIM6Q9HCJ5 1215 aa10.26□□□□□ -0.77
SMAD4-217ENST00000611848 PTPN22Q9Y2R2 807 aa10.26□□□□□ -0.77
SMAD4-217ENST00000611848 ZNFX1Q9P2E3 1918 aaKnown RBP10.26□□□□□ -0.77
SMAD4-217ENST00000611848 BAZ2BQ9UIF8 2168 aaKnown RBP10.26□□□□□ -0.77
SMAD4-217ENST00000611848 SH2B2O14492 632 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-217ENST00000611848 BRD1O95696 1058 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 PARP1P09874 1014 aaKnown RBP10.25□□□□□ -0.77
SMAD4-217ENST00000611848 SYDE2Q5VT97 1194 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 BLOC1S2Q6QNY1 142 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 RASGRP2Q7LDG7 609 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 PLEKHH3Q7Z736 793 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 RIOX2Q8IUF8 465 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 TNS4Q8IZW8 715 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 JAKMIP1Q96N16 626 aaKnown RBP10.25□□□□□ -0.77
SMAD4-217ENST00000611848 MAP3K14Q99558 947 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 MOV10L1Q9BXT6 1211 aaKnown RBP10.25□□□□□ -0.77
SMAD4-217ENST00000611848 TEX13BQ9BXU2 312 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 MROH8Q9H579 483 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 LY9Q9HBG7 655 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 ZNF214Q9UL59 606 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-217ENST00000611848 PRR12Q9ULL5 1215 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 FRMPD2Q68DX3 1309 aaPredicted RBP10.25□□□□□ -0.77
SMAD4-217ENST00000611848 MYH6P13533 1939 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 CCDC69A6NI79 296 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 STRNO43815 780 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 ERCC3P19447 782 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 AK2P54819 239 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 TROAPQ12815 778 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 TTBK2Q6IQ55 1244 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 GPR142Q7Z601 462 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 SGMS1Q86VZ5 419 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 RAET1EQ8TD07 263 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 SOCS4Q8WXH5 440 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 NUDT12Q9BQG2 462 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 SENP2Q9HC62 589 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 GJD2Q9UKL4 321 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 PNMA2Q9UL42 364 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 IVNS1ABPQ9Y6Y0 642 aa10.25□□□□□ -0.77
SMAD4-217ENST00000611848 SMCHD1A6NHR9 2005 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 PALM3A6NDB9 673 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-217ENST00000611848 GOLGA6L3A6NEY3 463 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 SLC15A5A6NIM6 579 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 DDAH1O94760 285 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 SLC16A2P36021 539 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 FLT3LGP49771 235 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 PRKCZQ05513 592 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 IRF5Q13568 498 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 COL9A3Q14050 684 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-217ENST00000611848 GRM4Q14833 912 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 KLHL40Q2TBA0 621 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 WDR78Q5VTH9 848 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 SNRNP48Q6IEG0 339 aaKnown RBP10.24□□□□□ -0.77
SMAD4-217ENST00000611848 NFXL1Q6ZNB6 911 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 RUFY3Q7L099 469 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 NCAPG2Q86XI2 1143 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 CPXCR1Q8N123 301 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 LRRC2Q9BYS8 371 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 GZF1Q9H116 711 aaPredicted RBP10.24□□□□□ -0.77
SMAD4-217ENST00000611848 RANBP17Q9H2T7 1088 aaKnown RBP10.24□□□□□ -0.77
SMAD4-217ENST00000611848 LIMCH1Q9UPQ0 1083 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 PTCH2Q9Y6C5 1203 aa10.24□□□□□ -0.77
SMAD4-217ENST00000611848 PLXNB2O15031 1838 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 KIAA0100Q14667 2235 aaKnown RBP10.23□□□□□ -0.77
SMAD4-217ENST00000611848 GOLGA8HP0CJ92 632 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 CALM1P0DP23 149 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 CALM2P0DP24 149 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 CALM3P0DP25 149 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 CASTP20810 708 aaKnown RBP10.23□□□□□ -0.77
SMAD4-217ENST00000611848 RPS6KB1P23443 525 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 PTPREP23469 700 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 FGD1P98174 961 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 TKFCQ3LXA3 575 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 MORN1Q5T089 497 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 SYNE3Q6ZMZ3 975 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 ZNF654Q8IZM8 581 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 ABRAQ8N0Z2 381 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 FBXL16Q8N461 479 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 CHST13Q8NET6 341 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 NUP133Q8WUM0 1156 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 ALDH8A1Q9H2A2 487 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-217ENST00000611848 RAVER2Q9HCJ3 691 aaKnown RBP10.23□□□□□ -0.77
SMAD4-217ENST00000611848 GPHNQ9NQX3 736 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-217ENST00000611848 LMBRD1Q9NUN5 540 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 FBXO40Q9UH90 709 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 MAD2L2Q9UI95 211 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 GABRQQ9UN88 632 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 SLC12A7Q9Y666 1083 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 CYP46A1Q9Y6A2 500 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 ZNF536O15090 1300 aa10.23□□□□□ -0.77
SMAD4-217ENST00000611848 KLRF2D3W0D1 207 aa10.22□□□□□ -0.77
SMAD4-217ENST00000611848 ICAM1P05362 532 aa10.22□□□□□ -0.77
SMAD4-217ENST00000611848 XRCC5P13010 732 aaKnown RBP10.22□□□□□ -0.77
SMAD4-217ENST00000611848 KIF5BP33176 963 aa10.22□□□□□ -0.77
SMAD4-217ENST00000611848 RGS2P41220 211 aa10.22□□□□□ -0.77
SMAD4-217ENST00000611848 GNAQP50148 359 aa10.22□□□□□ -0.77
SMAD4-217ENST00000611848 MAP2K5Q13163 448 aa10.22□□□□□ -0.77
SMAD4-217ENST00000611848 GRB14Q14449 540 aa10.22□□□□□ -0.77
SMAD4-217ENST00000611848 MCTP1Q6DN14 999 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms