RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 RETREG1Q9H6L5 497 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.01■□□□□ 0.63
CDK11B-205ENST00000611150 LRRC42Q9Y546 428 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 ATP9BO43861 1147 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 LGR5O75473 907 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 MYL5Q02045 173 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 MECOMQ03112 1051 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 MTF1Q14872 753 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 TAF7Q15545 349 aaPredicted RBP19.01■□□□□ 0.63
CDK11B-205ENST00000611150 RSPH1Q8WYR4 309 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 RPS6KC1Q96S38 1066 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 HSD3B7Q9H2F3 369 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 PLEKHG1Q9ULL1 1385 aa19.01■□□□□ 0.63
CDK11B-205ENST00000611150 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19■□□□□ 0.63
CDK11B-205ENST00000611150 C5orf60A6NFR6 353 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 CPA1P15085 419 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 GSTT1P30711 240 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 RESTQ13127 1097 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 NECTIN2Q92692 538 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 FAM192AQ9GZU8 254 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 SLC4A7Q9Y6M7 1214 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 KDM6AO15550 1401 aaPredicted RBP19■□□□□ 0.63
CDK11B-205ENST00000611150 SOWAHDA6NJG2 315 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 GOLGA8AA7E2F4 631 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 RCN1Q15293 331 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 PEX5LQ8IYB4 626 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 FNBP4Q8N3X1 1017 aaPredicted RBP19■□□□□ 0.63
CDK11B-205ENST00000611150 LINS1Q8NG48 757 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 DLGAP2Q9P1A6 1054 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 SLC12A4Q9UP95 1085 aa19■□□□□ 0.63
CDK11B-205ENST00000611150 R3HDM2Q9Y2K5 976 aaKnown RBP19■□□□□ 0.63
CDK11B-205ENST00000611150 TRIM43BA6NCK2 446 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 TRIM37O94972 964 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 PDHA1P08559 390 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 SMARCA1P28370 1054 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 CREB3L3Q68CJ9 461 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 IQCEQ6IPM2 695 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 EMBQ6PCB8 327 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 RASGRP2Q7LDG7 609 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 ZNF554Q86TJ5 538 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 ARHGAP18Q8N392 663 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 RRP36Q96EU6 259 aaKnown RBP18.99■□□□□ 0.63
CDK11B-205ENST00000611150 IFT43Q96FT9 208 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 TM6SF1Q9BZW5 370 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 CCT8L1PA6NM43 557 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 TRAPPC3O43617 180 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 TOM1O60784 492 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 ATP6V1C1P21283 382 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 RFC5P40937 340 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 EPHB4P54760 987 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 PLOD1Q02809 727 aaPredicted RBP18.99■□□□□ 0.63
CDK11B-205ENST00000611150 SPO11Q9Y5K1 396 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 TRPM2O94759 1503 aa18.99■□□□□ 0.63
CDK11B-205ENST00000611150 HMGB1P1B2RPK0 211 aaPredicted RBP18.98■□□□□ 0.63
CDK11B-205ENST00000611150 NAT2P11245 290 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 TSHZ3Q63HK5 1081 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 FAAH2Q6GMR7 532 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 FMR1NBQ8N0W7 255 aaPredicted RBP18.98■□□□□ 0.63
CDK11B-205ENST00000611150 LRRC43Q8N309 656 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 C1orf131Q8NDD1 294 aaKnown RBP18.98■□□□□ 0.63
CDK11B-205ENST00000611150 NOC3LQ8WTT2 800 aaKnown RBP18.98■□□□□ 0.63
CDK11B-205ENST00000611150 KCNMB3Q9NPA1 279 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 VAMP4O75379 141 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 NSUN2Q08J23 767 aaKnown RBP eCLIP18.98■□□□□ 0.63
CDK11B-205ENST00000611150 SLC44A4Q53GD3 710 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 OR52E8Q6IFG1 317 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 TRAPPC11Q7Z392 1133 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 SLF1Q9BQI6 1058 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 OSBPL10Q9BXB5 764 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 ZSWIM6Q9HCJ5 1215 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 SCOCQ9UIL1 159 aa18.98■□□□□ 0.63
CDK11B-205ENST00000611150 SLC3A2P08195 630 aaKnown RBP18.97■□□□□ 0.63
CDK11B-205ENST00000611150 PACS1Q6VY07 963 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 WDR60Q8WVS4 1066 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 MRPS27Q92552 414 aaKnown RBP18.97■□□□□ 0.63
CDK11B-205ENST00000611150 ABHD8Q96I13 439 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 CLMNQ96JQ2 1002 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 ZIM3Q96PE6 472 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 MMS19Q96T76 1030 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 CARD9Q9H257 536 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 RMND1Q9NWS8 449 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 BAG3O95817 575 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 KRT14P02533 472 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 KCNA6P17658 529 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 ATP11AP98196 1134 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 SPICE1Q8N0Z3 855 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 ZMAT2Q96NC0 199 aaKnown RBP18.97■□□□□ 0.63
CDK11B-205ENST00000611150 IL25Q9H293 177 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 SENP3Q9H4L4 574 aaPredicted RBP18.97■□□□□ 0.63
CDK11B-205ENST00000611150 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.97■□□□□ 0.63
CDK11B-205ENST00000611150 EMILIN1Q9Y6C2 1016 aa18.97■□□□□ 0.63
CDK11B-205ENST00000611150 AKR1B15C9JRZ8 316 aaPredicted RBP18.96■□□□□ 0.63
CDK11B-205ENST00000611150 NDUFB5O43674 189 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 A1BGP04217 495 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 ME1P48163 572 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 SULT2A1Q06520 285 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 QPCTQ16769 361 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 MEX3CQ5U5Q3 659 aaKnown RBP18.96■□□□□ 0.63
CDK11B-205ENST00000611150 TCERG1LQ5VWI1 586 aa18.96■□□□□ 0.63
CDK11B-205ENST00000611150 NAA16Q6N069 864 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms