RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 FECHP22830 423 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 CASP1P29466 404 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 ALDH1B1P30837 517 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 ADKP55263 362 aaKnown RBP11.77□□□□□ -0.53
PABPC1-224ENST00000610907 KARSQ15046 597 aaKnown RBP11.77□□□□□ -0.53
PABPC1-224ENST00000610907 NEK8Q86SG6 692 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 ADSSL1Q8N142 457 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 NLGN1Q8N2Q7 840 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 ZNF397Q8NF99 534 aaPredicted RBP11.77□□□□□ -0.53
PABPC1-224ENST00000610907 RASGRP4Q8TDF6 673 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 NOC3LQ8WTT2 800 aaKnown RBP11.77□□□□□ -0.53
PABPC1-224ENST00000610907 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 ZC3H12CQ9C0D7 883 aaKnown RBP11.77□□□□□ -0.53
PABPC1-224ENST00000610907 BLZF1Q9H2G9 400 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 TMEM60Q9H2L4 133 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 MTMR4Q9NYA4 1195 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 CTNND2Q9UQB3 1225 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 DAGLAQ9Y4D2 1042 aa11.77□□□□□ -0.53
PABPC1-224ENST00000610907 IGKV6D-41A0A0C4DH26 115 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 TEX33O43247 280 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 CCDC175P0C221 793 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 SNHG28P0DPA3 235 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 NPR1P16066 1061 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 EEF1GP26641 437 aaKnown RBP11.76□□□□□ -0.53
PABPC1-224ENST00000610907 GTF2IP78347 998 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 AMPD3Q01432 767 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 NAALADL2Q58DX5 795 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 TCP11X2Q5H9J9 407 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 PPP1R18Q6NYC8 613 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 HHIPL2Q6UWX4 724 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 SMYD4Q8IYR2 804 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-224ENST00000610907 RASSF8Q8NHQ8 419 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 STAMQ92783 540 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 DHTKD1Q96HY7 919 aaPredicted RBP11.76□□□□□ -0.53
PABPC1-224ENST00000610907 MRIQ9BWK5 157 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 DNAI1Q9UI46 699 aa11.76□□□□□ -0.53
PABPC1-224ENST00000610907 PSMA7O14818 248 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 N4BP3O15049 544 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 MFAP3LO75121 409 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 PDHBP11177 359 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 PRCPP42785 496 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 COPB1P53618 953 aaKnown RBP11.75□□□□□ -0.53
PABPC1-224ENST00000610907 RBL2Q08999 1139 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 KRT31Q15323 416 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 COBLL1Q53SF7 1204 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 USP17L2Q6R6M4 530 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 SLC51AQ86UW1 340 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 CABP7Q86V35 215 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 TMTC1Q8IUR5 882 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 REXO1Q8N1G1 1221 aaKnown RBP11.75□□□□□ -0.53
PABPC1-224ENST00000610907 GIMAP8Q8ND71 665 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-224ENST00000610907 C7orf25Q9BPX7 421 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
PABPC1-224ENST00000610907 THAP9Q9H5L6 903 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 QTRT2Q9H974 415 aaKnown RBP11.75□□□□□ -0.53
PABPC1-224ENST00000610907 QSER1Q2KHR3 1735 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 A0A1W2PQC6 194 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 KLRC4O43908 158 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 CCNT1O60563 726 aaKnown RBP11.75□□□□□ -0.53
PABPC1-224ENST00000610907 TTLL1O95922 423 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 CASQ1P31415 396 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 GOLGA8FQ08AF8 430 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 GOLGA8DPQ0D2H9 430 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 TUBB2AQ13885 445 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 POTEAQ6S8J7 498 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 KRT27Q7Z3Y8 459 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 FLAD1Q8NFF5 587 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 PIGSQ96S52 555 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 TUBB2BQ9BVA1 445 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 OGFRQ9NZT2 677 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 SERPINB13Q9UIV8 391 aa11.75□□□□□ -0.53
PABPC1-224ENST00000610907 BICDL2A1A5D9 508 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 SRGNP10124 158 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 CDC25AP30304 524 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 PDE6BP35913 854 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 PDIA5Q14554 519 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 TXNRD1Q16881 649 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 LETM2Q2VYF4 491 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 KMT5BQ4FZB7 885 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 GPATCH4Q5T3I0 446 aaKnown RBP11.74□□□□□ -0.53
PABPC1-224ENST00000610907 TOGARAM2Q6ZUX3 1019 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 RASGRP2Q7LDG7 609 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 CALML4Q96GE6 196 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 CCDC17Q96LX7 622 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 RAB34Q9BZG1 259 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 GLT8D2Q9H1C3 349 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 EHD4Q9H223 541 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 ADGRG1Q9Y653 693 aa11.74□□□□□ -0.53
PABPC1-224ENST00000610907 PNMA6FA0A0J9YX94 578 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 EFCAB8A8MWE9 144 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 HLA-DOAP06340 250 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 CASP14P31944 242 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 FXR2P51116 673 aaKnown RBP eCLIP11.73□□□□□ -0.53
PABPC1-224ENST00000610907 ADCY7P51828 1080 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 GNG11P61952 73 aa11.73□□□□□ -0.53
PABPC1-224ENST00000610907 FKBP1AP62942 108 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms