RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 TRMT112Q9UI30 125 aaKnown RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 ANGEL1Q9UNK9 670 aaKnown RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 IQSEC3Q9UPP2 1182 aaPredicted RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 SRPRBQ9Y5M8 271 aaKnown RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 COL5A3P25940 1745 aaPredicted RBP13.34□□□□□ -0.27
TP53-220ENST00000610623 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
TP53-220ENST00000610623 KRT86O43790 486 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 FGAP02671 866 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 ZFYP08048 801 aaPredicted RBP13.33□□□□□ -0.28
TP53-220ENST00000610623 OSBPP22059 807 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
TP53-220ENST00000610623 NAP1L1P55209 391 aaKnown RBP13.33□□□□□ -0.28
TP53-220ENST00000610623 HAND2P61296 217 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 CCDC40Q4G0X9 1142 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 EMBQ6PCB8 327 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.28
TP53-220ENST00000610623 GSPT2Q8IYD1 628 aaKnown RBP13.33□□□□□ -0.28
TP53-220ENST00000610623 GRAMD1CQ8IYS0 662 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 MARCH10Q8NA82 808 aaPredicted RBP13.33□□□□□ -0.28
TP53-220ENST00000610623 MAGEC3Q8TD91 643 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 OSBP2Q969R2 916 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 CEP131Q9UPN4 1083 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 BCORQ6W2J9 1755 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 SH2B2O14492 632 aaPredicted RBP13.33□□□□□ -0.28
TP53-220ENST00000610623 ZNF213O14771 459 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 HSF2BPO75031 334 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 SRGAP2O75044 1071 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 CD44P16070 742 aaKnown RBP13.33□□□□□ -0.28
TP53-220ENST00000610623 ITGA6P23229 1130 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 CDR1P51861 262 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 EPHB4P54760 987 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 CCDC122Q5T0U0 273 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 KLHL10Q6JEL2 608 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 IQCA1Q86XH1 822 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 FMNL3Q8IVF7 1028 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 TEX11Q8IYF3 940 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 CAPZA3Q96KX2 299 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 PHF12Q96QT6 1004 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 RABEP2Q9H5N1 569 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
TP53-220ENST00000610623 CLSTN1O94985 981 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 STX17P56962 302 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 APBA1Q02410 837 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 KRT31Q15323 416 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 SAFBQ15424 915 aaKnown RBP eCLIP13.32□□□□□ -0.28
TP53-220ENST00000610623 METTL24Q5JXM2 366 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 INTS5Q6P9B9 1019 aaKnown RBP13.32□□□□□ -0.28
TP53-220ENST00000610623 KDM7AQ6ZMT4 941 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 ZNF572Q7Z3I7 529 aaPredicted RBP13.32□□□□□ -0.28
TP53-220ENST00000610623 OR8K1Q8NGG5 319 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 WASF1Q92558 559 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 ZNF512BQ96KM6 892 aaPredicted RBP13.32□□□□□ -0.28
TP53-220ENST00000610623 SEC31BQ9NQW1 1179 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 TRIM10Q9UDY6 481 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 STK36Q9NRP7 1315 aa13.32□□□□□ -0.28
TP53-220ENST00000610623 PPP1R3GB7ZBB8 358 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 TOB1P50616 345 aaPredicted RBP13.31□□□□□ -0.28
TP53-220ENST00000610623 GRIN1Q05586 938 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 PDCLQ13371 301 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 TTMPQ5BVD1 217 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 CEP85LQ5SZL2 805 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 NAA35Q5VZE5 725 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 LDHAL6AQ6ZMR3 332 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 CAVIN3Q969G5 261 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 CHP1Q99653 195 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 GREM2Q9H772 168 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 NUTM2BA6NNL0 878 aaPredicted RBP13.31□□□□□ -0.28
TP53-220ENST00000610623 NUTM2EB1AL46 878 aaPredicted RBP13.31□□□□□ -0.28
TP53-220ENST00000610623 RNF225M0QZC1 329 aaPredicted RBP13.31□□□□□ -0.28
TP53-220ENST00000610623 FOXP2O15409 715 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 LSP1P33241 339 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 SIK1P57059 783 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 NNTQ13423 1086 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 NTRK3Q16288 839 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 TTC19Q6DKK2 380 aaPredicted RBP13.31□□□□□ -0.28
TP53-220ENST00000610623 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 PHKBQ93100 1093 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 FAXDC2Q96IV6 333 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 ACTR5Q9H9F9 607 aaPredicted RBP13.31□□□□□ -0.28
TP53-220ENST00000610623 CNNM1Q9NRU3 951 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 TBC1D2BQ9UPU7 963 aa13.31□□□□□ -0.28
TP53-220ENST00000610623 GOLGA6L7A0A1B0GV03 622 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 TNFRSF8P28908 595 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 CCT6AP40227 531 aaKnown RBP13.3□□□□□ -0.28
TP53-220ENST00000610623 CRKLP46109 303 aaKnown RBP13.3□□□□□ -0.28
TP53-220ENST00000610623 COPB1P53618 953 aaKnown RBP13.3□□□□□ -0.28
TP53-220ENST00000610623 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
TP53-220ENST00000610623 APOA5Q6Q788 366 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 CCDC13Q8IYE1 715 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 ARL8AQ96BM9 186 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 FOXP1Q9H334 677 aaPredicted RBP13.3□□□□□ -0.28
TP53-220ENST00000610623 RBM28Q9NW13 759 aaKnown RBP13.3□□□□□ -0.28
TP53-220ENST00000610623 UBN2Q6ZU65 1347 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 A0A1B0GUA9 196 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 PDE2AO00408 941 aaPredicted RBP13.3□□□□□ -0.28
TP53-220ENST00000610623 ADORA1P30542 326 aa13.3□□□□□ -0.28
TP53-220ENST00000610623 HERVK_113P62684 666 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms