RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 NLRC4Q9NPP4 1024 aa10.04□□□□□ -0.8
COL25A1-208ENST00000610288 AATFQ9NY61 560 aaKnown RBP eCLIP10.04□□□□□ -0.8
COL25A1-208ENST00000610288 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.04□□□□□ -0.8
COL25A1-208ENST00000610288 SCOCQ9UIL1 159 aa10.04□□□□□ -0.8
COL25A1-208ENST00000610288 SOWAHDA6NJG2 315 aa10.04□□□□□ -0.8
COL25A1-208ENST00000610288 USP27XA6NNY8 438 aa10.04□□□□□ -0.8
COL25A1-208ENST00000610288 SUN1O94901 812 aa10.04□□□□□ -0.8
COL25A1-208ENST00000610288 GCFC2P16383 781 aaKnown RBP10.04□□□□□ -0.8
COL25A1-208ENST00000610288 PDE1CQ14123 709 aaPredicted RBP10.04□□□□□ -0.8
COL25A1-208ENST00000610288 CABP7Q86V35 215 aa10.04□□□□□ -0.8
COL25A1-208ENST00000610288 PGBD1Q96JS3 809 aa10.04□□□□□ -0.8
COL25A1-208ENST00000610288 TADA3O75528 432 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 PSMD7P51665 324 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 NNTQ13423 1086 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 NBPF20Q3BBV1 942 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 SPATA5Q8NB90 893 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 PLEKHA4Q9H4M7 779 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 NOP53Q9NZM5 478 aaKnown RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 VPS54Q9P1Q0 977 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 FRMD4BQ9Y2L6 1034 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 NCOA3Q9Y6Q9 1424 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 BACH1O14867 736 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 KCNQ3O43525 872 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 TXKP42681 527 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 SP4Q02446 784 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 NONOQ15233 471 aaKnown RBP eCLIP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 CCDC105Q8IYK2 499 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 ZNF654Q8IZM8 581 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 COPRSQ9NQ92 184 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 CCDC87Q9NVE4 849 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 THEGQ9P2T0 379 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 LRWD1Q9UFC0 647 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 MAN1B1Q9UKM7 699 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 ATP10AO60312 1499 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 CPSF1Q10570 1443 aaKnown RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 B4DLN1 442 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 HEXIM1O94992 359 aaKnown RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 SLFN14P0C7P3 912 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 DDIT3P35638 169 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 PPARDQ03181 441 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 ANKRD20A3Q5VUR7 823 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 ACRBPQ8NEB7 543 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 PI4K2BQ8TCG2 481 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 MAIP1Q8WWC4 291 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 TTC36A6NLP5 189 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 CALUO43852 315 aaPredicted RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 CCNT1O60563 726 aaKnown RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 ZMYND10O75800 440 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 RPN1P04843 607 aaKnown RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 NR1D1P20393 614 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 FOXP1Q9H334 677 aaPredicted RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 CHCHD3Q9NX63 227 aaKnown RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 ANAPC4Q9UJX5 808 aa10.03□□□□□ -0.8
COL25A1-208ENST00000610288 PAIP2BQ9ULR5 123 aaKnown RBP10.03□□□□□ -0.8
COL25A1-208ENST00000610288 ARHGAP31Q2M1Z3 1444 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 HMGB1P1B2RPK0 211 aaPredicted RBP10.02□□□□□ -0.8
COL25A1-208ENST00000610288 NDUFA10O95299 355 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 GAS8O95995 478 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 PSMC4P43686 418 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 ARHGEF25Q86VW2 580 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 CNOT10Q9H9A5 744 aaKnown RBP10.02□□□□□ -0.8
COL25A1-208ENST00000610288 PKD2L1Q9P0L9 805 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 CTTNBP2NLQ9P2B4 639 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 GGA1Q9UJY5 639 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 REREQ9P2R6 1566 aa10.02□□□□□ -0.8
COL25A1-208ENST00000610288 TROVE2P10155 538 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL25A1-208ENST00000610288 COG7P83436 770 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 DIXDC1Q155Q3 683 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 INF2Q27J81 1249 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 TCP11Q8WWU5 503 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 YIPF3Q9GZM5 350 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 INTS9Q9NV88 658 aaKnown RBP10.02□□□□□ -0.81
COL25A1-208ENST00000610288 SATB2Q9UPW6 733 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 MROH5Q6ZUA9 1318 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 SEMA3EO15041 775 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 FGAP02671 866 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 TCIRG1Q13488 830 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 EPB41L5Q9HCM4 733 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 NDC80O14777 642 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 TRIM66O15016 1216 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 MFAP3LO75121 409 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 SF3A3Q12874 501 aaKnown RBP eCLIP10.02□□□□□ -0.81
COL25A1-208ENST00000610288 HERC4Q5GLZ8 1057 aaPredicted RBP10.02□□□□□ -0.81
COL25A1-208ENST00000610288 ZMYM1Q5SVZ6 1142 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 HAUS3Q68CZ6 603 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 SLC30A9Q6PML9 568 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 DPH6Q7L8W6 267 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 ZNF710Q8N1W2 664 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 ANKRD42Q8N9B4 389 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 TUBGCP2Q9BSJ2 902 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 SH2D4AQ9H788 454 aa10.02□□□□□ -0.81
COL25A1-208ENST00000610288 ANKRD65E5RJM6 399 aa10.01□□□□□ -0.81
COL25A1-208ENST00000610288 BUB1O43683 1085 aa10.01□□□□□ -0.81
COL25A1-208ENST00000610288 KRT15P19012 456 aa10.01□□□□□ -0.81
COL25A1-208ENST00000610288 TAF11Q15544 211 aa10.01□□□□□ -0.81
COL25A1-208ENST00000610288 GPR162Q16538 588 aa10.01□□□□□ -0.81
COL25A1-208ENST00000610288 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
COL25A1-208ENST00000610288 FANCBQ8NB91 859 aa10.01□□□□□ -0.81
COL25A1-208ENST00000610288 SNX29Q8TEQ0 813 aa10.01□□□□□ -0.81
COL25A1-208ENST00000610288 KIFAP3Q92845 792 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms