RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ABHD16BQ9H3Z7 469 aa15.89■□□□□ 0.13
POLR2J3-219ENST00000608621 HOMER2Q9NSB8 354 aa15.89■□□□□ 0.13
POLR2J3-219ENST00000608621 TMEM39AQ9NV64 488 aa15.89■□□□□ 0.13
POLR2J3-219ENST00000608621 PLIN4Q96Q06 1357 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 MYADML2A6NDP7 307 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 MOXD2PA6NHM9 499 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 KIAA0355O15063 1070 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 SLC1A4P43007 532 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 CNTN2Q02246 1040 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 FAAP100Q0VG06 881 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 IKQ13123 557 aaPredicted RBP15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 CCDC144BQ3MJ40 725 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 ZNF697Q5TEC3 545 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 ARMCX2Q7L311 632 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 FAM160B2Q86V87 743 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 GMCL1Q96IK5 515 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 AGBL1Q96MI9 1066 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 TOX2Q96NM4 488 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 IL17RBQ9NRM6 502 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 STX8Q9UNK0 236 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 SALL3Q9BXA9 1300 aa15.88■□□□□ 0.13
POLR2J3-219ENST00000608621 TSPY2A6NKD2 308 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 DCDC2CA8MYV0 355 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 ADCY6O43306 1168 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 NMT2O60551 498 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 C6orf222P0C671 652 aaPredicted RBP15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 EPHB4P54760 987 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 PPP4R3BQ5MIZ7 849 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 VPS53Q5VIR6 699 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 RCSD1Q6JBY9 416 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 KCTD1Q719H9 257 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 ANKRD33Q7Z3H0 272 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 CCDC144CPQ8IYA2 1237 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 VTI1AQ96AJ9 217 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 ACAD9Q9H845 621 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 SPC25Q9HBM1 224 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 ZNF536O15090 1300 aa15.87■□□□□ 0.13
POLR2J3-219ENST00000608621 MCM3APO60318 1980 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 RANBP6O60518 1105 aaKnown RBP15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 PLA2G6O60733 806 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 ASGR1P07306 291 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 RRP1P56182 461 aaKnown RBP15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 GJA9P57773 515 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 SNAP25P60880 206 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 SMAD3P84022 425 aaKnown RBP15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 FAM133AQ8N9E0 248 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 PCSK9Q8NBP7 692 aaKnown RBP15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 EVI5LQ96CN4 794 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 GLT1D1Q96MS3 346 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 TRERF1Q96PN7 1200 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 CRBNQ96SW2 442 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 RNF146Q9NTX7 359 aa15.86■□□□□ 0.13
POLR2J3-219ENST00000608621 SOWAHBA6NEL2 793 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 ALAS1P13196 640 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 CST5P28325 142 aaPredicted RBP15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 CDK7P50613 346 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 FPGSQ05932 587 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 TKFCQ3LXA3 575 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 GNASQ5JWF2 1037 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 CCDC174Q6PII3 467 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 CDX2Q99626 313 aaPredicted RBP15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 KATNBL1Q9H079 304 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 UPF3AQ9H1J1 476 aaKnown RBP15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 A1CFQ9NQ94 594 aaKnown RBP15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 HELLSQ9NRZ9 838 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 ANAPC4Q9UJX5 808 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 PRR12Q9ULL5 1215 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 MTMR7Q9Y216 660 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 ELP1O95163 1332 aa15.85■□□□□ 0.13
POLR2J3-219ENST00000608621 A0A0C4DFX4 3053 aa15.84■□□□□ 0.13
POLR2J3-219ENST00000608621 LAMA2P24043 3122 aaKnown RBP15.84■□□□□ 0.13
POLR2J3-219ENST00000608621 PDE1AP54750 535 aa15.84■□□□□ 0.13
POLR2J3-219ENST00000608621 ALX1Q15699 326 aa15.84■□□□□ 0.13
POLR2J3-219ENST00000608621 MUM1L1Q5H9M0 696 aa15.84■□□□□ 0.13
POLR2J3-219ENST00000608621 RASGRP2Q7LDG7 609 aa15.84■□□□□ 0.13
POLR2J3-219ENST00000608621 RNPC3Q96LT9 517 aaKnown RBP15.84■□□□□ 0.13
POLR2J3-219ENST00000608621 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 ASB14A6NK59 587 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 ARVCFO00192 962 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 CTAGE5O15320 804 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 ORC4O43929 436 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 TIMP1P01033 207 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 FGAP02671 866 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 FGRP09769 529 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 BEX3Q00994 111 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 TNFAIP2Q03169 654 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 NOL8Q76FK4 1167 aaKnown RBP15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 TTYH1Q9H313 450 aaPredicted RBP15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 TOMM22Q9NS69 142 aa15.83■□□□□ 0.12
POLR2J3-219ENST00000608621 A0A0U1RQG5 324 aaPredicted RBP15.82■□□□□ 0.12
POLR2J3-219ENST00000608621 NOVP48745 357 aa15.82■□□□□ 0.12
POLR2J3-219ENST00000608621 MCMDC2Q4G0Z9 681 aa15.82■□□□□ 0.12
POLR2J3-219ENST00000608621 TTBK2Q6IQ55 1244 aa15.82■□□□□ 0.12
POLR2J3-219ENST00000608621 FAM227BQ96M60 508 aa15.82■□□□□ 0.12
POLR2J3-219ENST00000608621 TBX21Q9UL17 535 aa15.82■□□□□ 0.12
POLR2J3-219ENST00000608621 DDX49Q9Y6V7 483 aaKnown RBP15.82■□□□□ 0.12
POLR2J3-219ENST00000608621 MROH7Q68CQ1 1323 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms