RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 FBXO40Q9UH90 709 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 STX8Q9UNK0 236 aa25.92■■□□□ 1.74
TMEM248-207ENST00000607045 PLXNA1Q9UIW2 1896 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 ZNF536O15090 1300 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 SYNRGQ9UMZ2 1314 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 PQBP1O60828 265 aaKnown RBP25.91■■□□□ 1.74
TMEM248-207ENST00000607045 SLC1A4P43007 532 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 PDE1AP54750 535 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 RASGRP2Q7LDG7 609 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 CHURC1Q8WUH1 139 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 EVI5LQ96CN4 794 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 GMCL1Q96IK5 515 aa25.91■■□□□ 1.74
TMEM248-207ENST00000607045 TSEN34Q9BSV6 310 aaKnown RBP25.91■■□□□ 1.74
TMEM248-207ENST00000607045 ZBTB47Q9UFB7 747 aaPredicted RBP25.91■■□□□ 1.74
TMEM248-207ENST00000607045 MYH4Q9Y623 1939 aa25.9■■□□□ 1.74
TMEM248-207ENST00000607045 TSPY2A6NKD2 308 aa25.9■■□□□ 1.74
TMEM248-207ENST00000607045 DUSP11O75319 330 aaKnown RBP25.9■■□□□ 1.74
TMEM248-207ENST00000607045 CLTBP09497 229 aa25.9■■□□□ 1.74
TMEM248-207ENST00000607045 STAT2P52630 851 aa25.9■■□□□ 1.74
TMEM248-207ENST00000607045 CCDC144BQ3MJ40 725 aa25.9■■□□□ 1.74
TMEM248-207ENST00000607045 RCSD1Q6JBY9 416 aa25.9■■□□□ 1.74
TMEM248-207ENST00000607045 RANBP6O60518 1105 aaKnown RBP25.89■■□□□ 1.74
TMEM248-207ENST00000607045 FDX1P10109 184 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 EPHB4P54760 987 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 IKQ13123 557 aaPredicted RBP25.89■■□□□ 1.74
TMEM248-207ENST00000607045 FAM109BQ6ICB4 259 aaPredicted RBP25.89■■□□□ 1.74
TMEM248-207ENST00000607045 ARMCX2Q7L311 632 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 FAM160B2Q86V87 743 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 CCDC144CPQ8IYA2 1237 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 FAM227BQ96M60 508 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 GUCD1Q96NT3 240 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 ABHD16BQ9H3Z7 469 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 ANAPC4Q9UJX5 808 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 MTMR7Q9Y216 660 aa25.89■■□□□ 1.74
TMEM248-207ENST00000607045 DLL1O00548 723 aa25.88■■□□□ 1.73
TMEM248-207ENST00000607045 FAAP100Q0VG06 881 aa25.88■■□□□ 1.73
TMEM248-207ENST00000607045 FAM133AQ8N9E0 248 aa25.88■■□□□ 1.73
TMEM248-207ENST00000607045 KATNBL1Q9H079 304 aa25.88■■□□□ 1.73
TMEM248-207ENST00000607045 A1CFQ9NQ94 594 aaKnown RBP25.88■■□□□ 1.73
TMEM248-207ENST00000607045 STARD7Q9NQZ5 370 aa25.88■■□□□ 1.73
TMEM248-207ENST00000607045 HELLSQ9NRZ9 838 aa25.88■■□□□ 1.73
TMEM248-207ENST00000607045 TMEM39AQ9NV64 488 aa25.88■■□□□ 1.73
TMEM248-207ENST00000607045 DDX49Q9Y6V7 483 aaKnown RBP25.88■■□□□ 1.73
TMEM248-207ENST00000607045 EYSQ5T1H1 3165 aa25.88■■□□□ 1.73
TMEM248-207ENST00000607045 SOWAHBA6NEL2 793 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 KIAA0355O15063 1070 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 PLA2G6O60733 806 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 FGAP02671 866 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 HDAC1Q13547 482 aaPredicted RBP25.87■■□□□ 1.73
TMEM248-207ENST00000607045 ALX1Q15699 326 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 CCDC174Q6PII3 467 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 TRERF1Q96PN7 1200 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 ACAD9Q9H845 621 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 RNF146Q9NTX7 359 aa25.87■■□□□ 1.73
TMEM248-207ENST00000607045 FGRP09769 529 aa25.86■■□□□ 1.73
TMEM248-207ENST00000607045 C6orf222P0C671 652 aaPredicted RBP25.86■■□□□ 1.73
TMEM248-207ENST00000607045 ALAS1P13196 640 aa25.86■■□□□ 1.73
TMEM248-207ENST00000607045 RAG1P15918 1043 aa25.86■■□□□ 1.73
TMEM248-207ENST00000607045 ANKRD33Q7Z3H0 272 aa25.86■■□□□ 1.73
TMEM248-207ENST00000607045 NUP133Q8WUM0 1156 aa25.86■■□□□ 1.73
TMEM248-207ENST00000607045 TOX2Q96NM4 488 aa25.86■■□□□ 1.73
TMEM248-207ENST00000607045 PRR12Q9ULL5 1215 aa25.86■■□□□ 1.73
TMEM248-207ENST00000607045 PRUNE2Q8WUY3 3088 aa25.86■■□□□ 1.73
TMEM248-207ENST00000607045 CUL9Q8IWT3 2517 aa25.85■■□□□ 1.73
TMEM248-207ENST00000607045 A0A0D9SFI3 127 aa25.85■■□□□ 1.73
TMEM248-207ENST00000607045 MOXD2PA6NHM9 499 aa25.85■■□□□ 1.73
TMEM248-207ENST00000607045 NOVP48745 357 aa25.85■■□□□ 1.73
TMEM248-207ENST00000607045 GJA9P57773 515 aa25.85■■□□□ 1.73
TMEM248-207ENST00000607045 MUM1L1Q5H9M0 696 aa25.85■■□□□ 1.73
TMEM248-207ENST00000607045 TTBK2Q6IQ55 1244 aa25.85■■□□□ 1.73
TMEM248-207ENST00000607045 LTBP2Q14767 1821 aa25.85■■□□□ 1.73
TMEM248-207ENST00000607045 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.84■■□□□ 1.73
TMEM248-207ENST00000607045 CTAGE5O15320 804 aa25.84■■□□□ 1.73
TMEM248-207ENST00000607045 ORC4O43929 436 aa25.84■■□□□ 1.73
TMEM248-207ENST00000607045 ASGR1P07306 291 aa25.84■■□□□ 1.73
TMEM248-207ENST00000607045 MCMDC2Q4G0Z9 681 aa25.84■■□□□ 1.73
TMEM248-207ENST00000607045 GNASQ5JWF2 1037 aa25.84■■□□□ 1.73
TMEM248-207ENST00000607045 PPP4R3BQ5MIZ7 849 aa25.84■■□□□ 1.73
TMEM248-207ENST00000607045 VTI1AQ96AJ9 217 aa25.84■■□□□ 1.73
TMEM248-207ENST00000607045 PURBQ96QR8 312 aaKnown RBP25.84■■□□□ 1.73
TMEM248-207ENST00000607045 DCDC2CA8MYV0 355 aa25.83■■□□□ 1.73
TMEM248-207ENST00000607045 PTGS1P23219 599 aa25.83■■□□□ 1.73
TMEM248-207ENST00000607045 SLC16A2P36021 539 aa25.83■■□□□ 1.73
TMEM248-207ENST00000607045 CDK7P50613 346 aa25.83■■□□□ 1.73
TMEM248-207ENST00000607045 RRP12Q5JTH9 1297 aaKnown RBP25.83■■□□□ 1.73
TMEM248-207ENST00000607045 ZNF589Q86UQ0 364 aaPredicted RBP25.83■■□□□ 1.73
TMEM248-207ENST00000607045 LNPKQ9C0E8 428 aa25.83■■□□□ 1.73
TMEM248-207ENST00000607045 UPF3AQ9H1J1 476 aaKnown RBP25.83■■□□□ 1.73
TMEM248-207ENST00000607045 SEMA6BQ9H3T3 888 aa25.83■■□□□ 1.73
TMEM248-207ENST00000607045 TOMM22Q9NS69 142 aa25.83■■□□□ 1.73
TMEM248-207ENST00000607045 ASTN1O14525 1302 aa25.83■■□□□ 1.73
TMEM248-207ENST00000607045 HSPD1P10809 573 aaKnown RBP25.82■■□□□ 1.72
TMEM248-207ENST00000607045 CST5P28325 142 aaPredicted RBP25.82■■□□□ 1.72
TMEM248-207ENST00000607045 BEX3Q00994 111 aa25.82■■□□□ 1.72
TMEM248-207ENST00000607045 NMIQ13287 307 aaPredicted RBP25.82■■□□□ 1.72
TMEM248-207ENST00000607045 TKFCQ3LXA3 575 aa25.82■■□□□ 1.72
TMEM248-207ENST00000607045 ZNF697Q5TEC3 545 aa25.82■■□□□ 1.72
TMEM248-207ENST00000607045 PCSK9Q8NBP7 692 aaKnown RBP25.82■■□□□ 1.72
TMEM248-207ENST00000607045 GLT1D1Q96MS3 346 aa25.82■■□□□ 1.72
TMEM248-207ENST00000607045 SPC25Q9HBM1 224 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms