RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 SOCS7O14512 581 aa22.46■■□□□ 1.19
MMP28-201ENST00000605424 UBA7P41226 1012 aa22.46■■□□□ 1.19
MMP28-201ENST00000605424 STAT6P42226 847 aa22.46■■□□□ 1.19
MMP28-201ENST00000605424 REXO1Q8N1G1 1221 aaKnown RBP22.46■■□□□ 1.19
MMP28-201ENST00000605424 SUPT20HQ8NEM7 779 aa22.46■■□□□ 1.19
MMP28-201ENST00000605424 MED15Q96RN5 788 aa22.46■■□□□ 1.19
MMP28-201ENST00000605424 UBA5Q9GZZ9 404 aa22.46■■□□□ 1.19
MMP28-201ENST00000605424 TMEM60Q9H2L4 133 aa22.46■■□□□ 1.19
MMP28-201ENST00000605424 MAGEF1Q9HAY2 307 aa22.46■■□□□ 1.19
MMP28-201ENST00000605424 PPP1R3GB7ZBB8 358 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 LRRC47Q8N1G4 583 aaKnown RBP22.45■■□□□ 1.18
MMP28-201ENST00000605424 PI4KBQ9UBF8 816 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 PAXBP1Q9Y5B6 917 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 SLX4Q8IY92 1834 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 PNMA6FA0A0J9YX94 578 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 OR52Z1P0C646 297 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 TNNT1P13805 278 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 NFIAQ12857 509 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 GRIPAP1Q4V328 841 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 RRAGBQ5VZM2 374 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 CCAR2Q8N163 923 aaKnown RBP22.45■■□□□ 1.18
MMP28-201ENST00000605424 C7orf43Q8WVR3 580 aa22.45■■□□□ 1.18
MMP28-201ENST00000605424 ATF5Q9Y2D1 282 aaPredicted RBP22.45■■□□□ 1.18
MMP28-201ENST00000605424 ADAMTSL1Q8N6G6 1762 aa22.44■■□□□ 1.18
MMP28-201ENST00000605424 FRMPD2Q68DX3 1309 aaPredicted RBP22.44■■□□□ 1.18
MMP28-201ENST00000605424 SYNRGQ9UMZ2 1314 aa22.44■■□□□ 1.18
MMP28-201ENST00000605424 KIF2AO00139 706 aaPredicted RBP22.44■■□□□ 1.18
MMP28-201ENST00000605424 TRMT44Q8IYL2 757 aaKnown RBP22.44■■□□□ 1.18
MMP28-201ENST00000605424 C16orf45Q96MC5 204 aaPredicted RBP22.44■■□□□ 1.18
MMP28-201ENST00000605424 CTAGE1Q96RT6 745 aa22.44■■□□□ 1.18
MMP28-201ENST00000605424 MTRQ99707 1265 aa22.44■■□□□ 1.18
MMP28-201ENST00000605424 CCNT1O60563 726 aaKnown RBP22.43■■□□□ 1.18
MMP28-201ENST00000605424 CD44P16070 742 aaKnown RBP22.43■■□□□ 1.18
MMP28-201ENST00000605424 ZNF658Q5TYW1 1059 aaPredicted RBP22.43■■□□□ 1.18
MMP28-201ENST00000605424 KIAA0825Q8IV33 1275 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 MKL1Q969V6 931 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 KCNQ5Q9NR82 932 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 ZNF646O15015 1829 aaPredicted RBP22.43■■□□□ 1.18
MMP28-201ENST00000605424 CCP110O43303 1012 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 RPN1P04843 607 aaKnown RBP22.43■■□□□ 1.18
MMP28-201ENST00000605424 ADCY7P51828 1080 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 KARSQ15046 597 aaKnown RBP22.43■■□□□ 1.18
MMP28-201ENST00000605424 LETM2Q2VYF4 491 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 NYAP1Q6ZVC0 841 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 TMX1Q9H3N1 280 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 SAMSN1Q9NSI8 373 aaKnown RBP22.43■■□□□ 1.18
MMP28-201ENST00000605424 INTS13Q9NVM9 706 aa22.43■■□□□ 1.18
MMP28-201ENST00000605424 TUBB4AP04350 444 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 CASP1P29466 404 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 TBX2Q13207 712 aaPredicted RBP22.42■■□□□ 1.18
MMP28-201ENST00000605424 KCNB1Q14721 858 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 NR1I3Q14994 352 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 PTPN14Q15678 1187 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 CDKAL1Q5VV42 579 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 SPECC1LQ69YQ0 1117 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 TBCKQ8TEA7 893 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 JMJD4Q9H9V9 463 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 NYAP2Q9P242 653 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 RWDD2AQ9UIY3 292 aa22.42■■□□□ 1.18
MMP28-201ENST00000605424 A0A1B0GTH6 734 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 MPHOSPH10O00566 681 aaKnown RBP22.41■■□□□ 1.18
MMP28-201ENST00000605424 EIF6P56537 245 aaKnown RBP22.41■■□□□ 1.18
MMP28-201ENST00000605424 ADGRF4Q8IZF3 695 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 SLC16A10Q8TF71 515 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 MTMR8Q96EF0 704 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 GTPBP4Q9BZE4 634 aaKnown RBP22.41■■□□□ 1.18
MMP28-201ENST00000605424 GPCPD1Q9NPB8 672 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 GOLGB1Q14789 3259 aaKnown RBP22.41■■□□□ 1.18
MMP28-201ENST00000605424 TMEM232C9JQI7 657 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 RBM5P52756 815 aaKnown RBP eCLIP22.41■■□□□ 1.18
MMP28-201ENST00000605424 NAALADL2Q58DX5 795 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 RASSF8Q8NHQ8 419 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 GLT8D2Q9H1C3 349 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 BLZF1Q9H2G9 400 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 KANSL2Q9H9L4 492 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 RIC8AQ9NPQ8 531 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 KBTBD4Q9NVX7 518 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 FAM198AQ9UFP1 575 aa22.41■■□□□ 1.18
MMP28-201ENST00000605424 SCN9AQ15858 1988 aa22.4■■□□□ 1.18
MMP28-201ENST00000605424 TATDN1Q6P1N9 297 aa22.4■■□□□ 1.18
MMP28-201ENST00000605424 STAMQ92783 540 aa22.4■■□□□ 1.18
MMP28-201ENST00000605424 BIN2Q9UBW5 565 aaPredicted RBP22.4■■□□□ 1.18
MMP28-201ENST00000605424 MYH4Q9Y623 1939 aa22.4■■□□□ 1.18
MMP28-201ENST00000605424 CDC25AP30304 524 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 CHRNA5P30532 468 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 CERKLQ49MI3 558 aaPredicted RBP22.39■■□□□ 1.18
MMP28-201ENST00000605424 CEP135Q66GS9 1140 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 KLHL10Q6JEL2 608 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 CABP7Q86V35 215 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 FCHSD1Q86WN1 690 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 ZFPM1Q8IX07 1006 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 DCAF4Q8WV16 495 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 TRIM34Q9BYJ4 488 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 DNAJC18Q9H819 358 aa22.39■■□□□ 1.18
MMP28-201ENST00000605424 COL2A1P02458 1487 aaPredicted RBP22.39■■□□□ 1.18
MMP28-201ENST00000605424 ZBTB5O15062 677 aa22.39■■□□□ 1.17
MMP28-201ENST00000605424 ENTPD3O75355 529 aa22.39■■□□□ 1.17
MMP28-201ENST00000605424 SPAG1Q07617 926 aa22.39■■□□□ 1.17
MMP28-201ENST00000605424 FILIP1LQ4L180 1135 aa22.39■■□□□ 1.17
MMP28-201ENST00000605424 JAKMIP3Q5VZ66 844 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms